Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4818 ATGCAAACACCACCACAAAGTAAATTCCTTTTATATTTGGACTTTGGATGTGAAGAGAATGCCTCCATTGTATATGCAGCCTTAGCTGTTGATAAGGAGTTGCACCCGGACAAAGTGACACAACTCATGAAGGTATCTAATGGAAAGCTTTCAGTGCACTTTGAGGCAGTAGAAGCAAGATTTCTTAGAGCATCTTTCAGTGCTTTTCTAGATGTCCTAACACTAGCTACAAACACAATTGAAGAATTTGGTCAAGGAATGGAGTTGTGA 270 0.3963 MQTPPQSKFLLYLDFGCEENASIVYAALAVDKELHPDKVTQLMKVSNGKLSVHFEAVEARFLRASFSAFLDVLTLATNTIEEFGQGMEL* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4818 89 Pfam Transcription factor Pcc1 12 81 IPR015419 -
Lja1g4818 89 PANTHER EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER 10 87 IPR015419 -
Lja1g4818 89 Gene3D - 2 87 - -
Lja1g4818 89 PANTHER GEO08993P1 10 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4818 Lja-Chr1 65560785 65563316 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4818 K15902 - gmx:100527271 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4818 1 65560785 65563316 Lja1g4818 1 65560785 65563316 ECH