Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4800 ATGGCTGTCAACGTTTCAATTCCACTCCCACGCAACGGTTTGTCCATACACAATCACTCAACGAAGCGCTCGTGTCTCACCACTTCACCTTCAACGCTCAGAATTTCTTGCTCTGGAGTAGGTGAGTTAGATGGATCTGAGTGCAAGGGAAGGTTACTTAATTTCAATGGAATCAAGAGTGTGGCCTGTGGTATTCTTGCAGCTTGTGCTGTTACTTCTGCTGCATTTCCTGTTACTGCTGCTAACCAGAGGCTTCCCCCATTATCAACTGACCCCAATCGCTGCGAGCGAGCATTTGTTGGCAACACAATCGGTCAGGCAAATGGTGTTTATGACAAACCATTAGATCTCCGGCTCTGTGATTTCACAAATGAAAAATCCAACCTGAAGGGCAAGACCCTGTCAGCAGCACTCATGTCAGATGCCAAGTTTGATGGTGCTGACATGACAGAAGTAGTAATGTCAAAGGCTTATGCGGTTGGCGGCAGCTTTAAAGGTGTAGACTTCTCAAATGCAGTCTTGGACCGTGTTAACTTTGAGAAAGCTGATCTTCAAGGAGCTGTATTTAAGAACACAGTGTTATCGGGCTCCACCTTCGATGATGCGAAGCTGGAAGGTGCAGTTTTCGAGGACACTATCATTGGTTACATTGATCTTCAGAAGCTATGCAGAAATAAGACAATCGCTGATGACTGGAGAGTTGAACTAGGATGTCGATGA 720 0.4583 MAVNVSIPLPRNGLSIHNHSTKRSCLTTSPSTLRISCSGVGELDGSECKGRLLNFNGIKSVACGILAACAVTSAAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDFTNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVNFEKADLQGAVFKNTVLSGSTFDDAKLEGAVFEDTIIGYIDLQKLCRNKTIADDWRVELGCR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4800 239 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 4 239 IPR044195 -
Lja1g4800 239 Pfam Pentapeptide repeats (8 copies) 174 211 IPR001646 -
Lja1g4800 239 Pfam Pentapeptide repeats (8 copies) 126 155 IPR001646 -
Lja1g4800 239 SUPERFAMILY Pentapeptide repeat-like 118 221 - -
Lja1g4800 239 Gene3D - 113 238 - -
Lja1g4800 239 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 4 239 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4800 - - gmx:100785667 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4800 1 65320857 65324552 Lja1g4800 1 65320857 65324552 ECH