Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4788 ATGGCTTCAAGGCTTGAGATTGAAGGAAGTGAGAATGAGCATGGAGAAGAAGAAGAAGAAGAGTGCCCGGTGAAACAAGTGGAACTCACTGTGCCAAAAACTGATGACCCTAGTTTGGACATTCTCACGTTCAGAATGTGGGTTCTAGGCATTCTTTCTTGCGTGTTACTCTCCTTTGTGAACCAGTTCTTTTGGTACAGAACTGAGCCTTTGACAGTGACATCAATTTCTGCCCAGATTGCTGTGGTTCCCATAGGCCATTTCATGGCGAGAACGTTGCCGACTCGCGTGTTCTTCAAGGGAAGGCGCTTTGAGTTCTCGCTCAATAGAGGGCCATTCAATATCAAGGAGCATGTTCTCATCACCATCTTTGCAAATTCTGGTGCTGGAACTGTCTATTCTACGCATATTTTGACTGCAGTGAAGCTCATATATAGAAGAAAACTGGATTTCCTTCCAGCCATATTGCTCATGTTCACCACTCAGGTTCTGGGATTTGGTTGGGCAGGACTGTTCAGGAAATATCTGGTTGAGCCAGGGGAGATGTGGTGGCCTAATAATCTAGTGCAGGTCTCATTATTCAGGGCTCTACATGAGAAAGACAAGAGATCAAAAGGAGGCACAACTCGTACTCAATTTTTTCTCCTTGTTTTGATCTCTTCCTTGGCATACTATGTGTTTCCCGGTTACATGTTTAAAATGCTGACATCTTTCTCTTGGGTATGTTGGCTTGCTCCCAAGTCTATCCTAGTCCAACAACTTGGTTCTGGCATGCGGGGTCTTGGCATTGCTGCACTGGGATTTGATTGGTCTACAATTTCTTCTTACCTTGGTAGTCCACTAGCTAGTCCATGGTTTGCCACTGCCAACATTGCTGTTGGATTTGTTTTTGTCATGTATGTGATGACACCAATTACTTACTGGTCAAATGCCTATGGTGCCAAGAAGTTTCCAATATTTTCAAGTGGCCTTTTTATGGGAAATGGCTCGGAATATGAAATTTTGTCTATTGTGAACTCCAATTTCCATCTTGATCGTGAGGCTTATTCAAAGAACGGGCCTTTACATCTCAGTACATTCTTTGCAATGACTTATGGCCTTGGATTCGCGGCGCTTTCTGCTACGGTAGTGCATGTTCTGCTCTTTCATGGAAGGGAAATATGGATGCAGAGTAAAAGGGCCTTTGAAGATAGTAAAAAAATTGACATACACACAAGACTTATGAGGAGGTACAAATCAGTCCCCCAGTGGTGGTTTCACATCATTCTAGTGGCGAACATAGCTCTGATTATTTTTATCTGTCAGTACTACAACGAATCACTTCAATTACCTTGGTGGGGTGTGTTGCTAGCTTGTGCAATTGCCATTTCCTTCACTCTACCAATCGGTATTATATCAGCCACTACAAATCAGCAACCAGGTTTGAACATTATAACAGAATATATCATTGGCTACATGTATCCGGAGTTCCCTGTGGCTAACATGTGCTTTAAGGTGTATGGTTACATTAGCATGGCTCAAGCACTAACGTTTTTGTCAGACTTCAAACTCGGTCACTACATGAAGATTCCACCAAGAACAATGTTCTTGGCACAGGTGGTAGGAACAATCATATCAGTAATTGTGTACACATTAACTGCATGGTGGTTGATGGGGACAATCCCTAACCTTTGTGACATCTCCAAATTACCAGATGATAGCCCTTGGCGATGCCCAATGGACAATGTCTTCTATGATGCTTCTGTTATCTGGGGTCTTCTAGGACCACGAAGGATATTTGGAGACCTCGGCGAATATGCCAAAGTGAATCTATTCTTCCTTGGTGGAGCCATTGCTCCACTTCTAGTTTGGCTTGCTCACAAGGCCTTCCCAGGACAAAAATGGATACGTCTGATTCACATGCCTATCATGCTTGGTGCTACATCAATGATGCCCCCTGCCACTGCAGTTAACTACACTAGTTGGTTACTCGTCGCATTTCTCTCAGGGTATGTGGTATTTAGGTACAAACAAGAATGGTGGAAGCGCTACAATTATGTTATGTCTGGTGGTCTTGATGCTGGAACTGCCTTTATGACAATCTTGCTGTTTCTTACACTCAATGGCATTAGTATTGACTGGTGGGGAAATGGTAATGTAGATGGGTGCCCCTTGGCTCGTTGTCCTACTGCAAAGGGCATTGCAATTGAAAGTTGTCCTTTGCAATGA 2208 0.4352 MASRLEIEGSENEHGEEEEEECPVKQVELTVPKTDDPSLDILTFRMWVLGILSCVLLSFVNQFFWYRTEPLTVTSISAQIAVVPIGHFMARTLPTRVFFKGRRFEFSLNRGPFNIKEHVLITIFANSGAGTVYSTHILTAVKLIYRRKLDFLPAILLMFTTQVLGFGWAGLFRKYLVEPGEMWWPNNLVQVSLFRALHEKDKRSKGGTTRTQFFLLVLISSLAYYVFPGYMFKMLTSFSWVCWLAPKSILVQQLGSGMRGLGIAALGFDWSTISSYLGSPLASPWFATANIAVGFVFVMYVMTPITYWSNAYGAKKFPIFSSGLFMGNGSEYEILSIVNSNFHLDREAYSKNGPLHLSTFFAMTYGLGFAALSATVVHVLLFHGREIWMQSKRAFEDSKKIDIHTRLMRRYKSVPQWWFHIILVANIALIIFICQYYNESLQLPWWGVLLACAIAISFTLPIGIISATTNQQPGLNIITEYIIGYMYPEFPVANMCFKVYGYISMAQALTFLSDFKLGHYMKIPPRTMFLAQVVGTIISVIVYTLTAWWLMGTIPNLCDISKLPDDSPWRCPMDNVFYDASVIWGLLGPRRIFGDLGEYAKVNLFFLGGAIAPLLVWLAHKAFPGQKWIRLIHMPIMLGATSMMPPATAVNYTSWLLVAFLSGYVVFRYKQEWWKRYNYVMSGGLDAGTAFMTILLFLTLNGISIDWWGNGNVDGCPLARCPTAKGIAIESCPLQ* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4788 735 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g4788 735 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 19 701 IPR004648 GO:0055085
Lja1g4788 735 PANTHER ISP4 LIKE PROTEIN 12 734 IPR004648 GO:0055085
Lja1g4788 735 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 27 700 IPR004813 GO:0035673
Lja1g4788 735 Pfam OPT oligopeptide transporter protein 42 698 IPR004813 GO:0035673
Lja1g4788 735 PANTHER OLIGOPEPTIDE TRANSPORTER 6 12 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4788 Lja-Chr1 64794515 64799022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4788 16 734 Organic Solute Cotransporters AT4G27730 70.539 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4788 - - gmx:100817739 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4788 1 64794515 64799022 Lja1g4788 1 64794515 64799022 ECH