Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4778 ATGGAGGGTTTGCCTTTGGAAATCTGTATGAACATTTTCTGTTTCTTGGATTACCAGCATCTAGCAGTTGCTCAACAAGTCTGCAAGAAGTGGAAGGTCATGGCTTCAGAGAATGCTATATGGTCTAACCTTTTTCTGGAGAGATGGGGAGGGGACCGCGCTGATTTTTACGCTCCAACGGGTTCAAAATCATGGAAAGATGTATATGAGGTGCAAGATCGTTGTGACCGCGTTGGAGTGGGTTTGAAGATAATTAGAGAAGGCTGTGACTACTACCTTGTTCACCTAGGTGAGATCCAGCAATATCTGGGTTCAAGAAAGAATAGGGAACAAGCAACAAGCCAGAGCTGCCACACTTCCAGTTCAGAAAAAAGGGACTTGAGTGGAGAAGGTTCCCTAGCTGAAGAGAGATCATGTCGAGGAATTTTGGACAGAATCCTTTTTTTCATCGGGGATTTGGAAGTTGCTTCCGCGGGTGCAAAACGCAGCCGTTTGATATGA 501 0.4531 MEGLPLEICMNIFCFLDYQHLAVAQQVCKKWKVMASENAIWSNLFLERWGGDRADFYAPTGSKSWKDVYEVQDRCDRVGVGLKIIREGCDYYLVHLGEIQQYLGSRKNREQATSQSCHTSSSEKRDLSGEGSLAEERSCRGILDRILFFIGDLEVASAGAKRSRLI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4778 166 SMART fbox_2 4 44 IPR001810 GO:0005515
Lja1g4778 166 PANTHER OS02G0686500 PROTEIN 1 165 - -
Lja1g4778 166 Gene3D - 1 78 - -
Lja1g4778 166 ProSiteProfiles F-box domain profile. 1 44 IPR001810 GO:0005515
Lja1g4778 166 SUPERFAMILY F-box domain 3 74 IPR036047 GO:0005515
Lja1g4778 166 PANTHER F-BOX ONLY PROTEIN 48-RELATED 1 165 IPR045118 GO:0019005|GO:0031146
Lja1g4778 166 Pfam F-box-like 3 46 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4778 - - gmx:100500296 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4778 1 64654620 64657074 Lja1g4778 1 64654620 64657074 ECH