Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4770 ATGGGTACTATAAGCAGTGAGGATCACAGAGAGATTGAGAATCATGTTAGAGAAGGCACTGAAGAGGCTCCACCTATGCCTGAGGAAGTGAGTAGAATAGCACCATGGGCGAGACAGATCACGATTCGGGGATTATTTGCTAGCGTCCTCATAGGAGTCATTTACAGTGTGATTGTGATGAAGCTGAACCTCACAACTGGTCTAGTCCCCAATCTCAATGTCTCAGCTGCTCTCCTTGGCTTTGTGTTCATCAGAACATGGACTAAGCTGCTTGAAAAGGCCAATATTGTTTCAACTCCATTCACCAGACAGGAGAATACAGTAATCCAGACTTGCGCGGTTGCTTGCTACAGCATCGCAGTAGGAGGTGGTTTTGGGTCTTACCTCTTGGGATTGAATAGGAGGACGTATGAGCAAGCAGGGATCGATACAAAAGGGAATGCTCCAAATAGTACCAAGGAACCTGAAGTGGGCTGGATGACAGGCTTTCTCTTTGTGAGCAGCTTTGTAGGGCTATTGGCGCTGGTCCCAATTAGAAAGATCATGATAATAGACTACAAATTAACTTATCCAAGTGGAACTGCTACTGCTGTTCTTATTAACGGGTTTCATACTCCTAAAGGAGATGTTATGGCCAGGAAGCAGGTTCACGGTTTCATGAAATTCTTCTCATTCAGCTTCCTCTGGGCTTTCTTCCAGTGGTTCTACACGGGTGGAGATAACTGCGGATTTATTCAATTTCCTACTTTTGGATTGCAAGCATGGAGAAACTCATTTTACTTCGATTTTAGCATGACTTATGTTGGAGCAGGAATGATTTGTTCCCATCTTGTCAATTTATCCGTGCTTCTTGGGGCTGTTGTTTCATGGGGAATTATGTGGCCCTTAATAAAGGGACTAAAAGGAGAATGGTACCCTGCAACTATATCAGAAAGTAGCATGAAGAGTCTTAATGGCTATAAGGTTTTCATTTCCATTGCATTGATTCTTGGTGATGGGCTTTACAATTTTGTCAAAGTCGTCTACTTCGCGGTCACAAATATCCGTGCCAACATGAAAAGGAAGAATTTAAATACATTTCTGGATAACCAGAAACAACTTCCTCTCGATGACCTTAGACGGAACGAAGTTTTTACAAGAGAAAGCATTCCCCTATGGTTGGCATGTGCAGGGTACATCTTTTTCTCCATCATTTCCGCCATTGTAATCCCTTTGATGTTTCCTCAGTTGAAGTGGTATTATGTGGTGTTTGCCTATCTTTTTGCACCATCTCTCGGCTTCTGCAATGCTTACGGCGCAGGCTTAACCGACATGAACATGGCCTACAACTACGGGAAAGTGGCTCTTTTTGTGCTTGCAGCCTTGGCCGGGAAAAACGATGGCGTAGTTGCTGGTCTCGTAGGGTGTGGCCTGATCAAATCCATTGTTTCCATTTCATCTGATTTGATGCATGATTTCAAGACCGGCCATCTCACATTCACTTCGCCTCGCGCGATGCTTGTGAGCCAAGCTATCGGGACCGCAATAGGCTGTGTTGTTGCTCCTCTCACATTCTTCCTTTTTTACAAGGCTTTCGATGTGGGGAACCCGGACGGAGTTTACAAGGCTCCATATGCCATCATATATAGAAACATGGCAATTCTTGGCGTGCAAGGGTTTTCCGCGCTTCCTCACCATTGCCTGCAGCTCTGTTATGGATTCTTCGCGTTTGCTATAGCAGCCAACTTGGTGAGAGATATTAGCCCTAGAAAGTTCGGGAGATGGGTTCCACTTCCAATGGCGATGGCTGTGCCTTTCCTAGTTGGTGGTTACTTTGCCATTGACATGTGTATGGGAAGTTTGATTGTGTTTGCCTGGCATAAACTGAACAAAAATGAGGCGGGTTTGATGGTTCCTGCAGTTGCTTCTGGGTTGATTTGTGGAGATGGAATGTGGATTCTCCCTTCATCCATTCTTGCTTTGCTAAAGGTTCGTCCCCCAATCTGCATGAGCTTCTTTCCATCAAGGTAG 2010 0.4498 MGTISSEDHREIENHVREGTEEAPPMPEEVSRIAPWARQITIRGLFASVLIGVIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRTWTKLLEKANIVSTPFTRQENTVIQTCAVACYSIAVGGGFGSYLLGLNRRTYEQAGIDTKGNAPNSTKEPEVGWMTGFLFVSSFVGLLALVPIRKIMIIDYKLTYPSGTATAVLINGFHTPKGDVMARKQVHGFMKFFSFSFLWAFFQWFYTGGDNCGFIQFPTFGLQAWRNSFYFDFSMTYVGAGMICSHLVNLSVLLGAVVSWGIMWPLIKGLKGEWYPATISESSMKSLNGYKVFISIALILGDGLYNFVKVVYFAVTNIRANMKRKNLNTFLDNQKQLPLDDLRRNEVFTRESIPLWLACAGYIFFSIISAIVIPLMFPQLKWYYVVFAYLFAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKNDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRAMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGVYKAPYAIIYRNMAILGVQGFSALPHHCLQLCYGFFAFAIAANLVRDISPRKFGRWVPLPMAMAVPFLVGGYFAIDMCMGSLIVFAWHKLNKNEAGLMVPAVASGLICGDGMWILPSSILALLKVRPPICMSFFPSR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4770 669 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 7 667 - -
Lja1g4770 669 MobiDBLite consensus disorder prediction 1 25 - -
Lja1g4770 669 Pfam OPT oligopeptide transporter protein 39 652 IPR004813 GO:0035673
Lja1g4770 669 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g4770 669 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 34 649 IPR004813 GO:0035673
Lja1g4770 669 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 7 667 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4770 Lja-Chr1 64429981 64434514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4770 - - gmx:100820417 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4770 1 64429981 64434514 Lja1g4770 1 64429981 64434514 ECH