Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4760 ATGGCTCACACTCACTCTTCCTTGTTGCTCTCCAGCACTCCGCGAATCCAATTCGCACCACCGTCCCTGTCAATCCCAACCCTGAATCCACCCTCCTCTCGATTCTCCACCCCTCACCCCTTCAGATTCATAGGCCTCACTTCCAAACCCAGCATCAACAAGCTCGTTTGCCAAGCTCAGAAAGCTTCAATGGCGGCAGCGGTTGAGGTTTTCGAGAAGGAGGAGCTCGCGGCGTCTCTGGCCAAATACGTCGCCGATCTTTCCAATAAGTTCACTGCTGAAAGAGGGGCTTTCACTGTTTGTTTGTCTGGTGGGTCTTTGATCAGCTATCTCCGGAAATTGCTTGAGGCTCCTTATGTTGATTCTCTTGAATGGTCTAAATGGCATGTGTTTTGGTTGGATGAGAGGGTTGTGCCTAAGACTCATGAAGATAGTAACTACAAGCTTGCTTTTGATGGGTTTCTCTCCAAGGTTCCGATTCCACCCGGTAATGTTTATGCAATTAATGATGCCCTGTCAGCTGAGGGAGCAGCTGATGATTATGAGACATGTCTCAGACACTTGGTCAAGAGCAATGTGATAACTTCATCAGTCAGCGGATTTCCGAAATTTGATCTCATGCTGCTGGGCATGGGCCCTGATGGGCACGTTGCTTCTTTGTTCCCAGGGCATCCTCTTGTGGAGGAGAATAAAAGATGGGTTGCCTTCATCAAGGACTCGCCAAAACCACCACCAGAGAGAATAACTTTTACCTTTCCGGTGATCAATTCCTCTGCTTATGCTGCACTTGTGGTGACTGGTTCTGGTAAAGCAGATGCAGTTCACTCTGTACTGCGTGGCGGATCGCAAAACTCTAATAAGCTTCCTGCTGCATTGGTTTCACCTGAAGGGGAGTTGAAATGGTTCTTGGACAAAGGTGCAGCCTCCAAGCTGTAG 936 0.4882 MAHTHSSLLLSSTPRIQFAPPSLSIPTLNPPSSRFSTPHPFRFIGLTSKPSINKLVCQAQKASMAAAVEVFEKEELAASLAKYVADLSNKFTAERGAFTVCLSGGSLISYLRKLLEAPYVDSLEWSKWHVFWLDERVVPKTHEDSNYKLAFDGFLSKVPIPPGNVYAINDALSAEGAADDYETCLRHLVKSNVITSSVSGFPKFDLMLLGMGPDGHVASLFPGHPLVEENKRWVAFIKDSPKPPPERITFTFPVINSSAYAALVVTGSGKADAVHSVLRGGSQNSNKLPAALVSPEGELKWFLDKGAASKL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4760 311 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 73 301 IPR006148 GO:0005975
Lja1g4760 311 PANTHER 6-PHOSPHOGLUCONOLACTONASE 3, CHLOROPLASTIC 52 311 - -
Lja1g4760 311 PANTHER 6-PHOSPHOGLUCONOLACTONASE 52 311 IPR039104 -
Lja1g4760 311 TIGRFAM pgl: 6-phosphogluconolactonase 72 311 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lja1g4760 311 Gene3D - 61 311 - -
Lja1g4760 311 CDD 6PGL 74 303 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lja1g4760 311 SUPERFAMILY NagB/RpiA/CoA transferase-like 73 311 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4760 Lja-Chr1 64268105 64271125 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4760 K01057 - gmx:100794078 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4760 1 64268105 64271125 Lja1g4760 1 64268105 64271125 ECH