Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4738 ATGGCTCAAGCAGTGTCTTTATCAACTACTCCTTCACCCCTGCTTTTGCAGAAAACAGGGTACCCTGTAAAATCACACAACAATGCTGGTGCACCATTCATGGCTTCCTTTCCATCAATGAGGCGATTTCCAAGGCTAGGAAGCGTGAGAGCTCAGGCTAATAATGGTGGTGATAACAAGGACAATTCAGTGGAAGTTCATGTTAACAAAGGTGACCAAGGAACCGCTGTGGAAAGAAAGCCTCGCAGAGCTGCCATGGACATTTCACCATTTGGCCTCTTAGACCCTTGGTCACCCATGAGGAGTATGCGCCAGATGCTGGACACAATGGACCGAATTTTCGAAGACGCCATGGTATTCCCTGGAAGAACCACAGGTGGAGGTGAGATCCGTGCCCCTTGGGACATCAAAGATGAAGAACATGAAATCCGAATGCGGTTCGACATGCCGGGTCTTTCGAAGGAAGATGTCAAGGTTTCAGTGGAGGAGGATGTGCTTGTCATCAAAGGTGGCCATAAGAATGAACAAAGTGGAGATGGAGATAACTCTTGGTCAAGCAAGAGTTACAGTTCCTATGACACAAGTTTGAAGCTTCCCGGTAACTGTGAGAAGGACAAGGTTAAGGCTGAGTTGAAGAATGGTGTGCTTTACATCACCATTCCTAAGACCAAGGTTCAACGCAAGGTTATAGATGTGGAAATTCAGCGAGATTCTAAGGCTTTTGTATAG 729 0.4664 MAQAVSLSTTPSPLLLQKTGYPVKSHNNAGAPFMASFPSMRRFPRLGSVRAQANNGGDNKDNSVEVHVNKGDQGTAVERKPRRAAMDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAMVFPGRTTGGGEIRAPWDIKDEEHEIRMRFDMPGLSKEDVKVSVEEDVLVIKGGHKNEQSGDGDNSWSSKSYSSYDTSLKLPGNCEKDKVKAELKNGVLYITIPKTKVQRKVIDVEIQRDSKAFV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4738 242 SUPERFAMILY HSP20-like chaperones 110 234 IPR008978 -
Lja1g4738 242 PANTHER HEAT SHOCK PROTEIN 21, CHLOROPLASTIC 1 235 - -
Lja1g4738 242 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 125 235 IPR002068 -
Lja1g4738 242 CDD ACD_sHsps-like 135 222 - -
Lja1g4738 242 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 235 IPR044587 GO:0009408
Lja1g4738 242 Pfam Hsp20/alpha crystallin family 135 235 IPR002068 -
Lja1g4738 242 Gene3D - 93 235 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4738 Lja-Chr1 63871031 63872810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4738 K13993 - gmx:548078 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4738 1 63871031 63872810 Lja1g4738 1 63871031 63872810 ECH