Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4720 ATGTCTCAAATCACAATAAAATCTCCAAAACACTGTGCAACAAAGCAAGGATTCAAAATTGAAAGAAACTACAAGAAGCTCTATTTTGCTTTCTCAGCATCTTTCACCACAATCCTACTACTCTTACTTCTTATCTGGTTCATTCTCCACCCTTCAAAGCCTCAATTCTCCCTCAAAGAAGTTGATATCTACCAATTTAACCTCTCAGGACCAATGCTTAACTCTTCAATCCAACTCACTCTCTTATCCAAGAATCCAAACCAGAAAGTTAGCATCTACTATGATGAGTTTCAAGTTTATGCAACCTACAAGGGACAAAGGATAACAGGTGATTCCTCTGTGCCTCCATTCTACCAAGGGAATGAAGAGAGTAATCTCTTAACAGCATCTTTGATTGGGAATGGCTTACCAGTGGCACCATCTCTTGGTTATGAAGTAGGCCGTGATCAAATTAATGGAAGACTAGTTTTGAATCTCAGAGTTATTGGGAAGCTTCGTTGGAAGATTGGAACTTGGGTCTCTGGACATTACAGGTTCAATGTTAATTGTGTTTCTGTCATGGCCTTTGGACCTTCTATGCTTGGTGCTCCTCTGATTTCAGCACAAGGGGCTCAGTGTTCTACCACAGTTTAA 633 0.4013 MSQITIKSPKHCATKQGFKIERNYKKLYFAFSASFTTILLLLLLIWFILHPSKPQFSLKEVDIYQFNLSGPMLNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKGQRITGDSSVPPFYQGNEESNLLTASLIGNGLPVAPSLGYEVGRDQINGRLVLNLRVIGKLRWKIGTWVSGHYRFNVNCVSVMAFGPSMLGAPLISAQGAQCSTTV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4720 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
Lja1g4720 210 PANTHER OS05G0367900 PROTEIN 14 209 IPR044839 GO:0098542
Lja1g4720 210 PANTHER BNAA02G10130D PROTEIN 14 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4720 Lja-Chr1 63389521 63390494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4720 27 183 EF-hand Containing Proteins AT5G21130 24.390 3.02e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4720 - - gmx:100783857 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4720 1 63389521 63390494 Lja1g4720 1 63389521 63390494 ECH