Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4713 ATGGATACCAAAGTGCTCTCTTCTGGAATCCGCTACTCAAACGTGCCGGAGAGTTACATCCGACCAGAATCCGAGCGACCTCATCTCTCCGAAGTCTCTGACTGTGATGATGTTCCTGTCATCGACCTTGGTTCTCAATACAGAACTCAGATTGTTCAGCAAATCGGTGAAGCTTGCAAGTCCTACGGCTTTTTCCAGATAATCAATCATGGGGTGTGTCTAGAAGCAGTGAGGGAAATGGGTGATGTGGCACGTGAATTTTTCAACCTGCCGGTGGAGGAGAAGTTGAAGTTGTACTCTGAGGATCCTACAAAAACAATGAGACTATCTACAAGTTTCAATGTGAACAAAGAGGCTGTGCATAATTGGAGAGACTATCTGAGGCTCCATTGTTATCCTTTGGACAAGTATGTGCCTGAATGGCCTTCGAATCCTCCCTCATTCAAGGAAATTGTGACAAATTACTGCAAAGAAGTTAGGGCATTGGGGTTCCGAATAGAGGAGTACATATCAGAGAGCTTGGGCCTAGAAAAAGATTACATAAAAAATGTTTTTAGGGAACAAGGGCAGCACATGGCAGTGAACTACTATCCACCATGCCCAGAACCAGATCTTACTTTTGGATTGCCAGGGCACACCGACCCAAATGCACTCACTATTCTGCTCCAAGATTTGGAGGTTACTGGCCTTCAAGTTCTCAAAGATGGCAAGTGGCTAGCTGTTAATCCTCAGCCAGATGCCTTTGTCATTAACATAGGTGACCAACTACAGGCTCTGAGCAATGGAATTTACAAGAGTGTCTGGCACCGTGCTGTGGTGAATGTTGAGAAGCCAAGGCTTTCAGTGGCATCATTTCTGGTTCCAGCTGATGAGGCCTTGATAAGCCCTGCAAAACCACTCACAGAAGATGGATCTGGAGCCATATACAAAGGATATACCTACCCAGAATATTATAAGAAGTTCTGGAGTAGGGACTTGGAGAAAGATCACTGTTTGGAATTTTTCAAAGTCAAGTAA 1017 0.4474 MDTKVLSSGIRYSNVPESYIRPESERPHLSEVSDCDDVPVIDLGSQYRTQIVQQIGEACKSYGFFQIINHGVCLEAVREMGDVAREFFNLPVEEKLKLYSEDPTKTMRLSTSFNVNKEAVHNWRDYLRLHCYPLDKYVPEWPSNPPSFKEIVTNYCKEVRALGFRIEEYISESLGLEKDYIKNVFREQGQHMAVNYYPPCPEPDLTFGLPGHTDPNALTILLQDLEVTGLQVLKDGKWLAVNPQPDAFVINIGDQLQALSNGIYKSVWHRAVVNVEKPRLSVASFLVPADEALISPAKPLTEDGSGAIYKGYTYPEYYKKFWSRDLEKDHCLEFFKVK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4713 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 336 - -
Lja1g4713 338 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 1 336 - -
Lja1g4713 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 142 IPR026992 -
Lja1g4713 338 Pfam 2OG-Fe(II) oxygenase superfamily 190 286 IPR044861 -
Lja1g4713 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 288 IPR005123 -
Lja1g4713 338 SUPERFAMILY Clavaminate synthase-like 11 326 - -
Lja1g4713 338 Gene3D - 4 328 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4713 Lja-Chr1 63036876 63049733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4713 11 337 Glycosyltransferase AT5G59530 34.615 1.48e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4713 K24028 - gmx:100782253 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4713 1 63036876 63049733 Lja1g4713 1 63036876 63049733 ECH