Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4705 ATGGCACCAGGTCCCGTTGTTGACGCATCCTCCGAGGCCGAAGCCCTCGAACAAGTTCTCTCCGCCGAAGAAACAACCTTAAAGAAGAAGCCTCAGCCGCAGGAAGATGATGCTCCCATTGTTGAGGACGTGAAGGATGATGACAAAGATGAAGCTGATGACGATGAAGATGAGGATGACGATGATGAGGATGATGACAAGGAAGATGGTGCTCTAGGTGGTTCTGAGGGTTCAAAGCAAAGCAGAAGTGAGAAGAAGAGTCGAAAAGCAATGTTGAAGCTTGGACTGAAACCTGTGACTGGCGTCAGTAGGGTCACAATCAAGAGAACAAAAAATATTCTTTTTTTCATCTCAAAACCTGATGTCTTCAAGAGTCCAAATTCCGAGACCTACGTCATATTCGGGGAGGCGAAAATAGAGGACCTGAGCTCTCAGCTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCTGTGATGGCAAAACAAGATCAAGGTACTGCAGCTGATGGAGGGCAGCCTGAGGAAGAAGAGGAGGTTGATGAAACTGGTGTGGAGCCGCATGACATTGATTTGGTCATGACACAAGCAGGAGTGTCCAGGGGCAAGGCCGTGAAGGCTCTCAAGACTCACAATGGGGACATTGTTGGTGCCATCATGGAACTCACTACTTAA 684 0.4854 MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEEVDETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELTT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4705 227 MobiDBLite consensus disorder prediction 163 188 - -
Lja1g4705 227 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 13 226 - -
Lja1g4705 227 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 13 226 IPR016641 GO:0005854
Lja1g4705 227 ProSiteProfiles NAC A/B domain profile. 81 146 IPR002715 -
Lja1g4705 227 CDD UBA_NAC_euk 190 226 - -
Lja1g4705 227 MobiDBLite consensus disorder prediction 19 89 - -
Lja1g4705 227 Pfam NAC domain 84 139 IPR002715 -
Lja1g4705 227 Gene3D - 188 225 - -
Lja1g4705 227 SMART NAC_2 84 140 IPR002715 -
Lja1g4705 227 Pfam HYPK UBA domain 187 226 IPR044034 -
Lja1g4705 227 Gene3D - 90 143 IPR038187 -
Lja1g4705 227 MobiDBLite consensus disorder prediction 174 188 - -
Lja1g4705 227 MobiDBLite consensus disorder prediction 40 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4705 Lja-Chr1 62199302 62202137 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4705 K03626 - gmx:100807402 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4705 1 62199302 62202137 Lja1g4705 1 62199302 62202137 ECH