LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g4703	ATGGAAGGTGCTGGGTCCTATAACGATTGGGGGTATTACTCACCACCACAACCCCATTCAACGCTATCGCCGTATGCGGCGGCGTTTAGCGTTAATCGCCCCCCTTTCAACGACGTCTCCGCCCCGTTTGTCGATTCTGATGAACCCGCATACGGCGTGCCACCAAACCCGGTTCACTACCCTGTTCACCCTCGATCTTATGGGTATGATTTCTTCCCTGAATCGGATAGTGTTTCAAAGCCATATGGATATTCAGGGTTGGCTTCTGAGGATTCGTTTTGGTATGATCAATGGCCTCCTACTAGCTCAAAACCAAGTCTTGCTGAACCCCAACCTTGCTTCCCTGATCTTAATTCTATGGGTTTGGCTTCTGAGGATTCGTTTGGTTATGAACAATGGCTTTCTGCTAGCTCAAAGCCAAGTCTCGGTGAAGCACAACCGTATTTTCCTTCGTATATTCCTTCCACTATTCCTAGCCCGACTTCTTCGGTGGCGGCTCCGATTCATTGGTCTTCCTCTTCTGGGTTTGCCCCCTTGGATGTTGTTCCCTCTTTTGGTGATTATGCTGCTGAGAATTCATCTGAGTTCGGATTTTCTGGTCTAGGCGCTGGCTCGTGGAATCAGTTTTCAGGTTTCGACCATGGTAAGGGTAAACAGGTGGGAGCTGAGAGCAGTTTGTCCTCAAAGCAAACAAGTTTAGTAGCTGCTGAAGAAAGGATGAACCAAGGATTTCAAGATATGAAAGTCTCTAACAATGGTGTGGCCCACATGGTTGATGGGGAGAAACACGGGACGCCTATAAATGCAGATCACTCAGTTGATAAATCTCCCCTGTGGGGAACTATCAAACGGCCTCAAATTTCAGGTACATCTGTTAAGCAGTCCCCTCTTGTTCCTCTGGAAATTCATGTTCCGGCTCCTTTGGAATCAGTTGCAGGTAATGATGTGGCCCACATGATTGATGGGGAGAAACACGGTATGCCTATAAATGCAGATCAGTCAGTTGATAAATCTTGCCCTTGGGGAACTATCAAACGGCCAGTTCAAGTTTCAGATGCATCTACTATGCAGTCCCCTCTGGTGCCTCTGGCAATTCATGTTCCGGCTCCTTCAAAATCATTTGCAGATACAGGGGCACATCACTTGTCATATACTGGTCCATATGACAAGCGCCCAAGCCCGCAAGGTCATCTCGGCATGCATCTGGAGACAATTGAACCTTCCTCATCAAACAATGCCTTGATTTCAGACAAAAATGTTTCAAGGGATGTTAAGGATTATGATATATTTAAAGGAAGGCGTGAATTTCAAAATCCTTATCTAAGTCTAGATAATTTATGCTCGAGACTTAGTGCTGTTGAGGATGTCAATTCTGGTGAGAAATCTTTTGAGGGTGGTGATCAATGTAATCCTGCTGTAGACTCACCTTGCTGGAAGGGAGCTCCTGCTGATCACATTTCTCATTATGAATCCTGTGAGGTTCTGCCTCCAGAACAAGTCCACAAAAAGGAGAAGCCTCTGAATTTTCCGCTTGATACAGAAAGTGGTGTGAAAAGGTCACCTGAACATTCAAATAGCTATCAGATGTACTCTGAAAATGTTAATCTGGAAACAAGATCATCAGGTTCTCCGTTGAAATGTTCATTGACAAAGTTTGCATCCAAAGATTGCAAGTCAGATGGTGCAGTGAGTGCTGGACCTTTTCTGTCTGAGCCAAGCTGTAATTGTAGGCTTCAATATCTTGATGATATTACCCAAACGAAGGAAAATGGAATCCCACCAATCAAGCCAACTGGCTGTGAGTCAGGATCTTCTTTCACTGAGCATCAAGTTTTTGTGAACGACAAATCGATGTCTCAGAACCAGCATACTCTATGCATAGGGGGTGCGGATGCTGGGTGCAATGTGACTAAATGCTTGGAATCTTTTACATCTCATACTGCAGAACATGCCAAATCACCTTCTTCAGCAGTAGATGCACCTGCTACCCCTGAAAATTCAGTTGGAAAAGTTTCAACTGAGAAATTAAATGTTCAACTGCTGGTTGATACATTGCAAAATATGTCAGAATTGCTTCTTTATCATTGTTCATATGATGGCTGTGAATTGAAAGAGCGAGATTGCAATATCCTTAAAAAAGTGATTGGTAATCTCAGTACATGTGCTTTAAAGAATGCTGAAGAAATTACCACAGCTCCAGAATGCCTCTTCCATCAGCCAGAAAATTCTAGATGTACTGGAGGGCCATGTGAGCTTCAACAGAATACAAGTTTCAAGAGGCCCCAATTAACCAAGATTGAGCAAGAGATCTCTGAAATCAAGCTTGAGAATCAGTTTGAAGAGGCAAACCAGCATTTCAGTTCTGAAAGACCACATTGGAAGCTTCCAGTTTGCATGTCCCCTAGGTTTGATGCTGAAACAACAAAGGCAGATAGCATGACTAAGGATCTAAAGAGGATTCTTAGTGAGAATTTCCATGATGAAGAAGAAGACTCTCAAACTGACTTATATAAGAATCTATGGCTCGAAGCTGAAGCTGCACTATGTTCTGTGTCTTACAGAGCTCGCTATAATCAAATGAAGATTGAAATGGAGAAACGGTCATACAACCAAAGAGACATGGAGGAGCAATCAAAAGCTGAGGTTATACCTAGTTCAAGCAAAAGTCAGAGTTCTGCAACCGAAGTGCACAATTATCCAAACCCTGGTTCTCCTGCCCAGGATTTGCCTGTCTTACATGATACCAATCCAAAGGAATTATCTCCTTTGAAAATTTCTAAAGATATGAACAAGGATACTACTCCATTGACACCTGATGGAACGGGTAGTGAAGACCTGATTAGTTTCATCCAGAATTATATTTCCGGAACAAACAACGTGGCTGAAAATGAAGAGTCTTCTGTTATGGCCAGATACTATGTGCTCAAAGCCCGGGCTGACAATCCATGCGTGGATACTGCCAATCTGGAGGAACCATCAGACTCAGCAGGCAAGTTGTCACCTGAAGGAGGAGATAATCAAAACCAAGTCAATTGCGGGACTTTCTGTCAGGACTCTCCTGTTCCTGCAGAAAACAAGGCTGATGATTACGAGGCATCTGTTGTGGCTAGGTTCCACATTCTCAAGTCCCGGGCGGAAGATTCAAGCTCTGTATCTTCACAAGAGAAATTGTCAGATGGTGTTGGATTTTCTGGCAAAAGAATGTATGACTCATCAATTTCAGAAAATGCTTCAGAGGGTAAGAGGATGAATGTTGATCTCAACAGTTCCTACGCTGCTGTGGACAAGTCAATCTCGAACGAGTTTCATGTGGACCTGGAGGACAATGATGAAGTTCAGCCCCGCGAGCTTCAGGTTCCTACTTATTACTCGGATGGATTAGCATCGGATTGGGAACATGTGTAG	3405	0.4388	MEGAGSYNDWGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGYDFFPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKPSLAEPQPCFPDLNSMGLASEDSFGYEQWLSASSKPSLGEAQPYFPSYIPSTIPSPTSSVAAPIHWSSSSGFAPLDVVPSFGDYAAENSSEFGFSGLGAGSWNQFSGFDHGKGKQVGAESSLSSKQTSLVAAEERMNQGFQDMKVSNNGVAHMVDGEKHGTPINADHSVDKSPLWGTIKRPQISGTSVKQSPLVPLEIHVPAPLESVAGNDVAHMIDGEKHGMPINADQSVDKSCPWGTIKRPVQVSDASTMQSPLVPLAIHVPAPSKSFADTGAHHLSYTGPYDKRPSPQGHLGMHLETIEPSSSNNALISDKNVSRDVKDYDIFKGRREFQNPYLSLDNLCSRLSAVEDVNSGEKSFEGGDQCNPAVDSPCWKGAPADHISHYESCEVLPPEQVHKKEKPLNFPLDTESGVKRSPEHSNSYQMYSENVNLETRSSGSPLKCSLTKFASKDCKSDGAVSAGPFLSEPSCNCRLQYLDDITQTKENGIPPIKPTGCESGSSFTEHQVFVNDKSMSQNQHTLCIGGADAGCNVTKCLESFTSHTAEHAKSPSSAVDAPATPENSVGKVSTEKLNVQLLVDTLQNMSELLLYHCSYDGCELKERDCNILKKVIGNLSTCALKNAEEITTAPECLFHQPENSRCTGGPCELQQNTSFKRPQLTKIEQEISEIKLENQFEEANQHFSSERPHWKLPVCMSPRFDAETTKADSMTKDLKRILSENFHDEEEDSQTDLYKNLWLEAEAALCSVSYRARYNQMKIEMEKRSYNQRDMEEQSKAEVIPSSSKSQSSATEVHNYPNPGSPAQDLPVLHDTNPKELSPLKISKDMNKDTTPLTPDGTGSEDLISFIQNYISGTNNVAENEESSVMARYYVLKARADNPCVDTANLEEPSDSAGKLSPEGGDNQNQVNCGTFCQDSPVPAENKADDYEASVVARFHILKSRAEDSSSVSSQEKLSDGVGFSGKRMYDSSISENASEGKRMNVDLNSSYAAVDKSISNEFHVDLEDNDEVQPRELQVPTYYSDGLASDWEHV*	1135

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g4703	1134	MobiDBLite	consensus disorder prediction	650	669	-	-
	Lja1g4703	1134	MobiDBLite	consensus disorder prediction	868	943	-	-
	Lja1g4703	1134	Coils	Coil	763	783	-	-
	Lja1g4703	1134	MobiDBLite	consensus disorder prediction	927	943	-	-
	Lja1g4703	1134	MobiDBLite	consensus disorder prediction	880	901	-	-
	Lja1g4703	1134	PANTHER	OS08G0157800 PROTEIN	9	1134	-	-
	Lja1g4703	1134	PANTHER	OS08G0157800 PROTEIN	9	1134	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g4703	-		-	lja:Lj1g3v1091050.3	1945.24

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g4703	1	62178361	62184821	Lja1g4703	1	62178361	62184821	ECH