Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4688 ATGGGTACCTCTGGATATGAAGAATCAGGTACCCAAATGCCTGAAACCACAAAAACTTCTTCCCTTTTCCGATACAATTCACCTTTCGTTCAGATCGTCCTTATTGGTTTCGTCTGTTTCTGCTGCCCCGGCATGTTCAACGCCCTCTCCGGCATGGGTGGCGGTGGCCAAGTCAATCCCACAGCCTCCAACAACTCCCTCACTGCTCTCTACACCACCTTCGCCGTCTTCGGCATCCTCGGCGGTGGCATCTACAACATCCTCGGCCCCCACCTCACCCTCTTCGCCGGTTGCTCCACCTACGTCCTCTACGCCGGTTCCTTCCTCTACTACAACCACCAGCAGCACCAAATGTTTGCAATAGTCTCCGGCGCGCTTCTCGGGATCGGAGCAGGGCTGTTATGGGCGGCGCAGGGTGCTATCATGACATCTTACCCGCCGGTGAACAGAAAAGGCACTTATATTTCTATTTTCTGGAGTATTTTCAACATGGGTGGTGTGATTGGTGGGTTGATTCCTTTCATTTTGAATTACCACCGTGGTGATTCTGCTGCTACTGTGAGTGATGGAACATACATTGGTTTCATGGCGTTTATGTCACTTGGAGCTGTTTTGTCACTGACCATCTTGCCGGCGAGTAAGGTTGTTCGTGATGATGGGACTAGATGCACCAACATGTTGTACTCCAATGTGTGGAGAGAGTGTGTGGAGATTCTGAATTTGTTCTACAACAAGAAGATGCTTCTCATGCTTCCTGCTGCTTGGGCTAGCAATTTCTTCTACACTTATCAATTCAATCATGTGAACAAGACACAGTTCAATTTGAGGACAAGGGGTTTGAACAATGTGTTCTATTGGGGAGCACAGATGTTGGGGTCTGTTGGGATTGGTTACATAATGGATTTCAGTTTCAAGAGCAGGAATAAGAGGGGGATTGTGGGAATTAGTGTGGTTGCTATTCTGGGATCTGCTATTTGGGGTGGTGCACTTGCTAATCAGATTAAACACCAAAAAGGGGAGATCTTGGATTTTAAGGAGTCAGGTTCTGGCTTTGCTGGACCCTTTGTCTTGTACTTTTCTTTTGGTTTGCTGGATGCCATGTTCCAGAGTATGGTGTACTGGGTTATTGGAGCTCTGGCTAATGATTCTGAGGTTCTTAGCAGGTACACTGGATTCTACAAAGGGATACAAAGTGCTGGGGCAGCAGTTGCATGGCAAATTGATAACCACAATGTGTCCCCTATGTCCCAATTGATTGTGAATTGGGTGCTCACTACAATAAGCTATCCTTTACTATTGGTTCTAGTAGTGATGGCAGTGAAAGAGGATGAGAATGCAGTAGATGAACCTGTCAAACAAGTTGCTCCTTCTTCTGCTTACAATGACTCTGTCCAATAG 1398 0.47 MGTSGYEESGTQMPETTKTSSLFRYNSPFVQIVLIGFVCFCCPGMFNALSGMGGGGQVNPTASNNSLTALYTTFAVFGILGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHQQHQMFAIVSGALLGIGAGLLWAAQGAIMTSYPPVNRKGTYISIFWSIFNMGGVIGGLIPFILNYHRGDSAATVSDGTYIGFMAFMSLGAVLSLTILPASKVVRDDGTRCTNMLYSNVWRECVEILNLFYNKKMLLMLPAAWASNFFYTYQFNHVNKTQFNLRTRGLNNVFYWGAQMLGSVGIGYIMDFSFKSRNKRGIVGISVVAILGSAIWGGALANQIKHQKGEILDFKESGSGFAGPFVLYFSFGLLDAMFQSMVYWVIGALANDSEVLSRYTGFYKGIQSAGAAVAWQIDNHNVSPMSQLIVNWVLTTISYPLLLVLVVMAVKEDENAVDEPVKQVAPSSAYNDSVQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4688 465 PANTHER ET TRANSLATION PRODUCT-RELATED 1 452 - -
Lja1g4688 465 Gene3D MFS general substrate transporter like domains 19 444 IPR036259 -
Lja1g4688 465 PANTHER UNC93-LIKE PROTEIN 1 1 452 - -
Lja1g4688 465 CDD MFS_unc93-like 30 441 - -
Lja1g4688 465 Pfam Ion channel regulatory protein UNC-93 56 256 IPR010291 -
Lja1g4688 465 SUPERFAMILY MFS general substrate transporter 33 438 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4688 Lja-Chr1 61906740 61909007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4688 - - gmx:100796714 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4688 1 61906740 61909007 Lja1g4688 1 61906740 61909007 ECH