Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4682 ATGGAACCTGGGAAGCAAGGGGTGATGGTGGCGAAGATATTACCACAGCAGCTTCTCAACCCAATAGAGCAGCTTCAAACTCGCTTCAAGGAAGTCGAATCCGGCTTCAAACTCTGGCTCTCCAAGCAATCCATCGCCGTCGAAGCCGCCGTCGTCACCACCACCAGCGCCGCCCAAGGTGCCGCCATCGGCGCCTTCATGGGTACCCTCACTGGGGACGCTTCCTCCCCGTTTCCTACTCCGCCACCTAATGCCTCTCTTAACCCTCAGGCTATGGCTTCTCTTAATCAAGCTCAGGCTCTTGCTGGAGGCCCTTTAGTTCAAGCTCGTAATTTTGCTGTCATGACTGGTGTGAATGCTGGTATTACAAGTGTTTTGAAAAGGATAAGGGGGAAGGAAGATGTGCAGTCCAGCATGGCAGCAGCTTTTGGCTCTGGCGCCATGTTTTCATTGGTAAGTGGCGTGGGCGGACCAAATCAAGCAGCAAATGCAGTCACCTCTGGGCTTTTCTTTGCACTTGTTCAAGGTGGACTTTTCCAGTTGGGACAAAAGTTTTCTCAACCACCTGTTGAAGATACTAACTATGTGAAAACAAGACACATGTTGCACAACCTTGGCCTTCAGAATTACGAAAAGCATTTTAAGAAAGGCTTGTTAACGGACAACACTTTACCTTTACTAACGGACAGTGCTCTCAGAGATGTGAAGATTCCTCCTGGACCCAGGCTTTTAATTCTAGACCACATCCAGAGGGACCCAGATGCAAAAGAGAAACGAGGAGGCCGGAGTTGA 792 0.5 MEPGKQGVMVAKILPQQLLNPIEQLQTRFKEVESGFKLWLSKQSIAVEAAVVTTTSAAQGAAIGAFMGTLTGDASSPFPTPPPNASLNPQAMASLNQAQALAGGPLVQARNFAVMTGVNAGITSVLKRIRGKEDVQSSMAAAFGSGAMFSLVSGVGGPNQAANAVTSGLFFALVQGGLFQLGQKFSQPPVEDTNYVKTRHMLHNLGLQNYEKHFKKGLLTDNTLPLLTDSALRDVKIPPGPRLLILDHIQRDPDAKEKRGGRS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4682 263 SUPERFAMILY SAM/Pointed domain 196 254 IPR013761 -
Lja1g4682 263 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2 19 251 - -
Lja1g4682 263 Gene3D - 199 260 IPR013761 -
Lja1g4682 263 CDD SAM_superfamily 200 251 - -
Lja1g4682 263 Pfam SAM domain (Sterile alpha motif) 202 251 IPR001660 GO:0005515
Lja1g4682 263 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 171 - -
Lja1g4682 263 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 19 251 IPR039175 GO:0042721|GO:0045039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4682 - - gmx:100775460 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4682 1 61776898 61779864 Lja1g4682 1 61776898 61779864 ECH