Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4679 ATGGATGCAGATTCATGGACTAGTTGCCCTTTCTGCGATTCAACAGTCCCCTCATCCCAAATCAATCGGCACGCCAATGCTCACTTTGAAGATGATCCTGAGCTACCCCAACATATTCATTTTCCCCCTAATTCCCACCTTCAATCATCTCTTCCGAGTGAACAAACAGACAATGACTTGCAGTGCGGAGCAAATTCTGGAGAGTGTGGTGGTGAAACTAGTAGAGATAGCGGGGAATGCAAAATGGATGATAAGTTATCTTGCTTGATTGGTTTACAGGCGAGGAGTGAATTTTGCAAAGTTGAAGGGGGTTTGATGGCTTTGTTAAGAGATTGTTTGGAGTGTGAAGCTGAAAATTCGAGAAGCGTTTTATCTGGGTATGTTGATCATTTCCAGAGTCTTCAGTCTGAGGATTCTGGTTGGGGTTGTGGATGGCGTAACATTCAAATGCTTAGCTCTCACTTGCTAGTGCAAAGGCCAGAAGCAAGAGAAGCTTTGTTTGGGGGTTCGGGATTTGTTACGGATATCCCTTCGCTCCAGAGATGGCTTGAGATTGCTTGGGAGAAGGGTTTTGATGCGCCTGGATCGGCTCAATTTGATCATGTTGTTTATGGTTCAAAAAAATGGATAGGAACTACTGAGTGCGCAGCTCTTTTGCGATCCTTTGGTCTTCGAGCGAGAGTAGTGGATTTTGGTCCCAAGGAATCCCAATCTGCCTCAGGTTCAAGTGTTGATAGCACTATGAATACAGCAAATACTAGTAAGATGGTAGAAAGTAAAGATAAAAAAGGTGAGGCTTATCAAGTTCTCATGGATTTTGTGTGGAATTACTTTTCTGATGAAAGCTCAATCCAATTTGGTCAACAGTGTGTTGTGGTCAGTGAAAAAATGCCCTTATACTTTCAACATGCTGGTCACTCAAGAACAATAGTTGGAATTCATGTCAAACATCAAGAGACTGGAATTCTACAATATAATCTCCTTGTTCTGGACCCTGCTCATAGTACGGCTGCTCTTGAAAGATCACTACGACAGAAAGTTGGATGGCAGAAACTCATAAAAAGGGGAATGCATACACTGAAGAAGCCACAATACCAGCTGTGTTATGTTGATCCTGGAATTGCTGGAGAGGAGGAGATAGAAAAACTCAAGACAATTGACAGTGTCTTCCTTGAAATTTAG 1182 0.4264 MDADSWTSCPFCDSTVPSSQINRHANAHFEDDPELPQHIHFPPNSHLQSSLPSEQTDNDLQCGANSGECGGETSRDSGECKMDDKLSCLIGLQARSEFCKVEGGLMALLRDCLECEAENSRSVLSGYVDHFQSLQSEDSGWGCGWRNIQMLSSHLLVQRPEAREALFGGSGFVTDIPSLQRWLEIAWEKGFDAPGSAQFDHVVYGSKKWIGTTECAALLRSFGLRARVVDFGPKESQSASGSSVDSTMNTANTSKMVESKDKKGEAYQVLMDFVWNYFSDESSIQFGQQCVVVSEKMPLYFQHAGHSRTIVGIHVKHQETGILQYNLLVLDPAHSTAALERSLRQKVGWQKLIKRGMHTLKKPQYQLCYVDPGIAGEEEIEKLKTIDSVFLEI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4679 393 MobiDBLite consensus disorder prediction 42 65 - -
Lja1g4679 393 Pfam Peptidase family C78 120 368 IPR012462 -
Lja1g4679 393 MobiDBLite consensus disorder prediction 33 65 - -
Lja1g4679 393 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 1 393 - -
Lja1g4679 393 PANTHER ZINC FINGER PROTEIN 1 393 - -
Lja1g4679 393 Gene3D - 110 375 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4679 K24134 - gmx:100781936 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4679 1 61671863 61678192 Lja1g4679 1 61671863 61678192 ECH