Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4617 ATGTTCACTCTCACATTTTCTCCTCCTCATTTTGTGAAAAAACTCGGATGTCACTCTGAAAGGGGTGTTCAATTTGACACCGGCGGTGCGTTTTTCCGGGAAGAAAGCGCCACCGCCCGTGACCTTGGTGTTCTCGCTGCTGCCCTTCAGAGGAAGGCTAATGGGAGTTTGCGTGTTCTTGATGCTCTTTGTGGGTGTGGGATTCGCTCGTTGCGCTATTTGGCGGAGGCGGAGGCGGATTTTGTGGCTGCGAATGATGGGAATGAGAGCTATGGAAGGACCATTGTTGGGAACTTGGAGAGGGCTGCCAAGGAGGACGAGGGGAGGTGGGTGGTTACTCATTTGGAAGCGAATCGTGTGATGACTGGTTATTATTTGCACAAGAGTTTGTTTGATTTTGTTGATGTTGATTCGTTTGGAAGTGATTCTTCTTTCTTGAGATCCGCTATGAATGCTTTGAAGCTTGGTGGTTTGCTCTATGTTACTTCAACTGATGGCTATTCTTCTGGTGGTCACCGTCCTCATCATTCTTTAGCTGCATATGGATCCTATGTGCGCCCTATGCCATTTTCGAATGAGATTGGTTTGCGAATGCTTATAGGTGGGGCGGTAAGGGAGGCTGCAGTGTTGGGGTATCACATTACTCCTTTATATTCGTACTATGCTTATCATGGACCTGTTTTCAGAGTCTTGCTCAGATTAAATCGTGGGAAGATTCATGACAGCAGGCATTATGGTTATATTGGGTTTTGCCACAAGTGTGGAAATTCCCATGAATTTTCTTGGGATCAGCTTGGCCAGTTCAGTTGCTCCTGCAGTATGCCACAGGTTTCAAACTCCCTTGTGGTGTCTGGACCTCTTTGGACAGGGCCCCTTCACGATGCGGCGTATCTTACGGACATGTTAAATCTAGCAAAGCAGTGGGGATGGATTGGTTGTGACGGCAAAGACAGTCTTGAAAAGCTTATCAATGTGATGGTGGATGAAAGTGACCCCAAGTTGCCATTTGGGTATATCAAGTTAGATGAGATGGCAAGCCGCGCGAAAATTAATTCTCCACCTCTGAAGACCTTGATGAGCGCTATTCAACAGAAGGGTTATGCTGCCAGCAGGTCTCACATAAAAACAAATGCAATCAAGACGAATTGCCCCATGACTGAATGCATTAGTATTGCCAAAGAACTACTGCAGGTTTCTGTCTCTTCGTGA 1209 0.4665 MFTLTFSPPHFVKKLGCHSERGVQFDTGGAFFREESATARDLGVLAAALQRKANGSLRVLDALCGCGIRSLRYLAEAEADFVAANDGNESYGRTIVGNLERAAKEDEGRWVVTHLEANRVMTGYYLHKSLFDFVDVDSFGSDSSFLRSAMNALKLGGLLYVTSTDGYSSGGHRPHHSLAAYGSYVRPMPFSNEIGLRMLIGGAVREAAVLGYHITPLYSYYAYHGPVFRVLLRLNRGKIHDSRHYGYIGFCHKCGNSHEFSWDQLGQFSCSCSMPQVSNSLVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDGKDSLEKLINVMVDESDPKLPFGYIKLDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIKTNAIKTNCPMTECISIAKELLQVSVSS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4617 402 CDD AdoMet_MTases 58 162 - -
Lja1g4617 402 Gene3D - 335 395 IPR042296 -
Lja1g4617 402 ProSiteProfiles Trm1 methyltransferase domain profile. 16 392 IPR002905 GO:0003723|GO:0004809|GO:0008033
Lja1g4617 402 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 31 391 IPR002905 GO:0003723|GO:0004809|GO:0008033
Lja1g4617 402 Gene3D Vaccinia Virus protein VP39 14 331 IPR029063 -
Lja1g4617 402 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 393 IPR029063 -
Lja1g4617 402 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 13 397 - -
Lja1g4617 402 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 13 397 IPR002905 GO:0003723|GO:0004809|GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4617 Lja-Chr1 60604255 60607562 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4617 K00555 - gmx:100788340 665.225