Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4612 ATGGGGGAGGGTGAAAAGTTTCAGCTGGGAACTGCCGGTGCGTTGGGTTTATCCGTGGTGTCATCTGTATCGATTGTGATATGTAATAAGGCACTGATGAGCACATTGCATTTCATTTTCGCGACAACTTTGACAAGCTGGCATCTTCTTGTTACATTTTGCTCTCTCCATGTGGCGCTAAAAATGAGGCTTTTTGAGCACAAACCTTTCGAGCGGAAAGCAGTGATGGGATTTGGAATTCTAAATGGAACTTCAATTGGACTCTTAAATTTGAGTCTAGGCTTCAATTCTGTCGGTTTCTATCAGATGACTAAGCTGGCAATCATTCCATGCACTATTCTGTTGGAGATCCTTTTTCTTGGAAAGAAATTCAGTAGAAGAATACAATTTTCCCTCTCCGTCCTCCTTCTGGGTGTTGGGATCGCAACAGTTACTGATTTGCAACTAAATGCTTTGGGCTCATTCTTATCTTTTCTAGCGGTGATTACAACATGTGTTGCTCAGATTATGACAAATACCATCCAGAAGAAGTATAAGGTTTCTTCTACCCAGCTATTGTATCAATCATGTCCATATCAAGCAGCAACCTTGTTGATATCTGGACCATATTTGGATAAAGTTCTTACCAACCTTAATGTCTTTGCTTTCAAGTACACAACCGAAGTGACGTTTGTCATTGTTCTTTCATGCCTTATCTCAATCTCTGTAAATTTTAGCACATTTCTTGTAATTGGAAGGACATCTCCAGTGACCTATCAGGTTCTTGGACATTTGAAGACATGCCTTGTATTGGCTTTTGGTTATATAATTGTCCAAGACCCTTTTAGCTGGAGGAACATACTGGGGATTTTGGTAGCCATGGTTGGGATGATTATGTATTCCTATTACTGCGTTCTTGAGAATCAGCAAAAAGCAGCTGAAACTGCAGCATTAGCATCACAGGCAAGAGAAGGTGAATCTGATCCCCTCATTAGTGTGGAAAATGGAAGTGCATTATTGAGCAAAAGGCCTCCTGTCTGGAACAAAGAAAAAGACTAG 1038 0.4066 MGEGEKFQLGTAGALGLSVVSSVSIVICNKALMSTLHFIFATTLTSWHLLVTFCSLHVALKMRLFEHKPFERKAVMGFGILNGTSIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEILFLGKKFSRRIQFSLSVLLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLISGPYLDKVLTNLNVFAFKYTTEVTFVIVLSCLISISVNFSTFLVIGRTSPVTYQVLGHLKTCLVLAFGYIIVQDPFSWRNILGILVAMVGMIMYSYYCVLENQQKAAETAALASQAREGESDPLISVENGSALLSKRPPVWNKEKD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4612 345 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
Lja1g4612 345 PANTHER SOLUTE CARRIER FAMILY 35 2 322 - -
Lja1g4612 345 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 2 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4612 Lja-Chr1 60558054 60562237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4612 22 325 Organic Solute Cotransporters AT1G77610 24.601 8.32e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4612 K15285 - gmx:100788989 601.668