Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4605 ATGGAAGGAAAAGGTTACACTCTAGATGGCACTGTGGATCTTGCTGGACGGCCTGTGCTTTCTTCTCTAACTGGGAAGCAGAAAGCATGCACTTACATTCTTGTTTACCGTGTATTGGAAAGATTCGCCTACTATGGGGTAGGAGCAAACTTAGTGAATTTTATGACAACCCAACTCAACAAAGACGTGGTATCATCAATAACCAGTTTCAATAACTGGAGTGGCTTGGCTACGTTGACCCCAATTCTTGGTGCTTACATAGCAGATACTTACACTGGCCGCTTTTGGACAATCACTTTTTCCTTGCTCATATATGCCATAGGTCTTGTGCTTCTGGTCCTGACAACTACACTAAAAAGCTTGAGACCAGCATGTGAAAATGGAATTTGCAGAGAAGCATCTAACTTACAAGTAGCATTGTTCTACACATCACTATACACAATAGCAGTTGGAAGTGGTGCTGTAAAACCCAACATGTCAACTTTTGGTGCTGACCAATTTGATGATTTCCGCCATGAAGAAAAAGAGCAAAAAGTTTCATTCTTCAATTGGTGGGCATTTAATGGAGCCTGTGGCTCTCTAATGGCAACTCTGTTTGTGGTGTACATTCAAGAGAAAAATGGATGGGGTTTGGCCTACAGTTTATCTGCTATTGGTTTTCTACTTTCCTCTATTATCTTTTTTTGGGGTTCCCCAGTTTACAGGCATAAATCCAGACAGGCTAGGAGTCCTTCAATGAACTTTATCAGAGTCCCACTTGTTGCTTTCAGAAATAGGAAACTCCAGCTTCCTTGTAACCCTTCAGAACTGCATGAGTTTCAGTTGAACTATTACATTAGTAGTGGCGCAAGAAAAATTCATCACACTTCTCATTTCAGTTTCTTAGACAGGGCAGCAATAAGAGAAAGCAACACAGATCTCTCAAATCCCCCCTGCACAGTGACTCAAGTAGAGGGAACCAAGCTTGTCTTAGGCATGTTCCAAATATGGTTACTGATGCTAATTCCCACCAACTGCTGGGCACTAGAATCAACCATTTTCGTCAGGCAAGGCACAACAATGGACAGAACACTTGGCCCCAAGTTCCGTTTACCAGCAGCTTCACTCTGGTGCTTTATAGTCCTCACCACCCTCATCTGCCTCCCCATCTACGACCATTACTTCATACCGTTCATGCGCCGAAGAACCGGCAACCACAGAGGAATCAAATTGCTCCAGAGGGTCGGCATCGGAATGGCCATCCAAGTCATAGCCATGGCAGTTACTTATGCTGTAGAAACTCAAAGAATGAGTGTCATAAAGAAGCATCACATAGTTGGGCCTGAAGAAACAGTTCCTATGAGCATATTCTGGTTATTGCCTCAAAACATTATACTTGGTGTTTCAAACGCTTTCCTTGCCACTGGGATGCTAGAGTTTTTCTATGATCAATCTCCAGAGGAAATGAAAGGCCTTGGCACAACATTGTGCACGAGCTGTGTAGCTGCTGGGAGCTACATTAACACCTTTCTAGTGACTATGATTGATAAACTGAACTGGATTGGGAACAACCTGAATGACTCTCATCTAGATTACTATTATGCCTTTCTTTTTGTGATATCTGCTCTTAATTTTGGTGTCTTTCTGTGGGTGTCAAGTGGGTACATTTACAAGAAGGAAAATACAAGCACAACTGAGGTGCATGATATTGAGATGAGCGCAGAGAAGACTGTGAAGTACTGA 1722 0.4274 MEGKGYTLDGTVDLAGRPVLSSLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRVPLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQVEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQRMSVIKKHHIVGPEETVPMSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFLVTMIDKLNWIGNNLNDSHLDYYYAFLFVISALNFGVFLWVSSGYIYKKENTSTTEVHDIEMSAEKTVKY* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4605 573 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 559 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g4605 573 SUPERFAMILY MFS general substrate transporter 35 544 IPR036259 -
Lja1g4605 573 Gene3D MFS general substrate transporter like domains 2 557 IPR036259 -
Lja1g4605 573 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 11 559 - -
Lja1g4605 573 CDD MFS_NPF5 27 550 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja1g4605 573 Pfam POT family 95 511 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4605 Lja-Chr1 60442791 60448625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4605 4 556 Organic Solute Cotransporters AT2G40460 55.893 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4605 - - gmx:100789214 798.119