Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4589 ATGCAAATGCAGCTTGAATTTGATAGGGCTGCTTTGAAACATATGAAGATTGATCGTGTGAAGAAATATGACTACTGCTTGCCTTATTTCTACGACCCATTTAAGGAAGATGAGCTTGAACAGAGCACTGAGGTTCCAATACTATTTCCAGCAGAGCCAAATCCGGTTGTCTGTGGTTTTGATTGGGAATTAGATGAACTTGAGGAGTTCACTGATAAGCTCATACAGAAGGAGGTGTTATCAGAAGATCACAAAGATGCTTTTAAGGAATTTGCCAAGGAAAAAGTACGTGAAGCAAAGAAAACTAATAGAGAGGCAAGGGAAGCTCGAAGAAAAGCCATTGAAGAAATGAGGGAGGAAACTAAAGCTGTAATTAAGAATAAGCGATCTTATAAGTTCTACCCTGTGAAAAGTCCAGACACACCTGATGTATCAATGAAGTCTAGATACATTAACAGGTATTATGGAAACGCTAATGAAGAACTGTGA 489 0.3865 MQMQLEFDRAALKHMKIDRVKKYDYCLPYFYDPFKEDELEQSTEVPILFPAEPNPVVCGFDWELDELEEFTDKLIQKEVLSEDHKDAFKEFAKEKVREAKKTNREAREARRKAIEEMREETKAVIKNKRSYKFYPVKSPDTPDVSMKSRYINRYYGNANEEL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4589 162 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 9 160 - -
Lja1g4589 162 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 9 160 IPR039313 GO:1900034
Lja1g4589 162 Coils Coil 89 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4589 Lja-Chr1 60093885 60097986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4589 - - lja:Lj0g3v0088419.1 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4589 1 60093885 60097986 Lja1g4589 1 60093885 60097986 ECH
Lja4g0677 4 5574217 5578845 Lja1g4589 1 60093885 60097986 PCT