Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4579 ATGGGGGAGCCAACATCATCACACACCGCCAAAGCTTCTTCAACAACACCTCCCCCACCACCACCAGTACCCCTCTCCCCCAAAATCTCCCTCGTCCAACCCTCCCAGAAGAAGAAACACAAACCCAAAATGGTTCGCGTCTTCCGCTCTGTCTTCCGTTCCTTACCCATCATAACCCCCGTATGTAAATTCCCCTCACTTCCCGCCGGCATCCCCGACGGCCACCACCACCACCACCATCTCAGAACCGTCAATGGAAGCAGCGGCGGTACGAGGGTATCGGGCACGCTATTCGGATACCCTAAGGGACGTGTGAGCCTGTCCGTTCAGGAGACTCCAAAGTGCTTCCCCACGGCAGTGATCGAGCTGTCCATGCATACCAGCGCGCTGCAGAAGGAGATGGCAGCCGGGATGGTGAGGGTGGCGCTCGAGTGTGAGAAGCGGTCAGAGAAGGACAAGACGAGGTTGTTGGAGGAGCCGTTGTGGACAATGTTTTGTAATGGGAAGAAAACCGGGTACGGTATGAGGAGGGAGGCGACGGAGGAGGATCTTAGTGTGATGGAGCTCCTCAAGGCCGTGTCGATGGGTGCCGGCGTTCTTCCGATGAGGTCTGGCGGCGGTGATGATGTGGATGGTGGAGAGATGACTTATGTGCGAGCACCTTTTGAGCATGTCGTGGGGTCGAAGGATTCAGAGACTCTTTACATGTTAAGTCCAGATGGGAATACTGCTGGGCCTGAGCTTACTATATTTTTTGTCAGGATTTGA 768 0.5534 MGEPTSSHTAKASSTTPPPPPPVPLSPKISLVQPSQKKKHKPKMVRVFRSVFRSLPIITPVCKFPSLPAGIPDGHHHHHHLRTVNGSSGGTRVSGTLFGYPKGRVSLSVQETPKCFPTAVIELSMHTSALQKEMAAGMVRVALECEKRSEKDKTRLLEEPLWTMFCNGKKTGYGMRREATEEDLSVMELLKAVSMGAGVLPMRSGGGDDVDGGEMTYVRAPFEHVVGSKDSETLYMLSPDGNTAGPELTIFFVRI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4579 255 PANTHER PROTEIN MIZU-KUSSEI 1 8 255 - -
Lja1g4579 255 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 93 255 IPR006460 GO:0010274
Lja1g4579 255 Pfam Protein of unknown function, DUF617 93 254 IPR006460 GO:0010274
Lja1g4579 255 PANTHER PROTEIN MIZU-KUSSEI 1 8 255 IPR006460 GO:0010274
Lja1g4579 255 MobiDBLite consensus disorder prediction 14 28 - -
Lja1g4579 255 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4579 Lja-Chr1 59902785 59903635 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4579 - - gmx:100792553 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4579 1 59902785 59903635 Lja1g4579 1 59902785 59903635 ECH
Lja4g0759 4 6322504 6323439 Lja1g4579 1 59902785 59903635 PCT