Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4578 ATGGCTCTTCTCACTCCCAGTATCTCAGTGCGTTTCCCACAACTCCAGCAACACCAACAGCAATGGAAATTCAAACCCAAACCCTTCTTCCCCCGTGCTTCCTCTTTCACTTCCACTTCCTTAGCTCAACTCAGTGTCGGTGAAGATTTACCATCAAACTACGGCGATTGGCTGCCCACTCCGGACCCTCACCTCCGCAGAAGAGCCGGCATTCTGCTCCATCCGACGTCGTTTCGAGGCCCCTACGGCATTGGCGATCTCGGCGACGAGGCCTTTCGTTTCGTTGACTGGCTCCACAACGCTGGTTGCTCGCTTTGGCAGGTTCTTCCTCTTGTGCCTCCTGGTAGAAAGGCGAATGAAGAGGGATCTCCTTACTCTGGCCAGGATGCCAATTGTGGGAACACCCTCTTGATCTCTCTTCAAGGCCTTGTTGATGATGGGTTGCTTGAAAAACATGAGCTTCCTCAACCAATTGATGCAGAGCGCGTTGACTTTTCGGTTGTTGCTGACCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGTAAAGGGGAACTCAAAACACAGCTTGAAAATTTTCGCAAGGACCCTAACATATCAAGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGACAGTTTAAACACATTCAGCTGGTACAACTGGCCTGAACCTTTAAGAAACCGCCATCTTGTAGCTCTAGAAAATATTTATGAACAAAAGCGAGATTTTATAAATGTATTTATTGCACAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGCGACTATGCACAAAGTAGGGGAATCAGTATAATGGGAGACATGCCTATATATGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTTCACTGAACAGGAAAGGCTTTCCCCTTTTAGTTAGTGGTGTTCCTCCTGATGCATTCAGTGAAACCGGACAGCTGTGGGGCAGCCCCCTGTATGATTGGAATGCTATGGAGAAGGAAGGATACTCATGGTGGATACGTCGCATACAGCGCGCACAGAATTTATATGATGAATTTAGGATTGACCACTTTAGAGGACTTGCTGGATATTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGAATATCTTTCTTTGATGCCATTTTCAGAGCTGTTGGAAAGGTTAATATTATTGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTCAAACTAAGAAAATCCATTGGAGCCCCTGGAATGGCTGTTCTCCAGTTTGGGTTCGGAGGTGGTGCAGATAATCCTCATTTGCCTCATAATCACGAGTTCAACCAAGTTGTCTATACAGGGACTCATGACAATGACACGGTCAAAGGTTGGTGGGAAGCTATGAACCAAGAAGAGAAATCCAAAGCATTAAGTTATCTTTCATTAACTGGGGAGGATGACATTTCGTGGGTGCTAATCCAGAAGGTACTAGCTTCTGTTGCTCAAACAGCAGTAATACCTATGCAAGATGTTCTTGGACTGGGGAACTCTGCTAGGATGAATATTCCTGCAACTCAGTTTGGAAACTGGGGTTGGAGAATTGCAAGTTCTGTGAGCTTTGATAACTTGGAGAGAGAAGCAGCCAGACTTAAAGATATGCTTTCAATGTATGGCCGGCTTTGA 1698 0.4547 MALLTPSISVRFPQLQQHQQQWKFKPKPFFPRASSFTSTSLAQLSVGEDLPSNYGDWLPTPDPHLRRRAGILLHPTSFRGPYGIGDLGDEAFRFVDWLHNAGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLQGLVDDGLLEKHELPQPIDAERVDFSVVADLKDPLITKAAERLISSKGELKTQLENFRKDPNISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRHLVALENIYEQKRDFINVFIAQQFLFQRQWQKVRDYAQSRGISIMGDMPIYVGYHSADVWANKNQFSLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWNAMEKEGYSWWIRRIQRAQNLYDEFRIDHFRGLAGYWAVPSEAKVAMVGKWKVGPGISFFDAIFRAVGKVNIIAEDLGVITEDVVKLRKSIGAPGMAVLQFGFGGGADNPHLPHNHEFNQVVYTGTHDNDTVKGWWEAMNQEEKSKALSYLSLTGEDDISWVLIQKVLASVAQTAVIPMQDVLGLGNSARMNIPATQFGNWGWRIASSVSFDNLEREAARLKDMLSMYGRL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4578 565 Pfam 4-alpha-glucanotransferase 73 540 IPR003385 GO:0004134|GO:0005975
Lja1g4578 565 TIGRFAM malQ: 4-alpha-glucanotransferase 66 551 IPR003385 GO:0004134|GO:0005975
Lja1g4578 565 Gene3D Glycosidases 64 565 - -
Lja1g4578 565 Coils Coil 180 200 - -
Lja1g4578 565 SUPERFAMILY (Trans)glycosidases 48 564 IPR017853 -
Lja1g4578 565 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 18 565 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4578 23 565 Glycoside Hydrolase AT5G64860 73.346 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4578 K00705 - gmx:100795007 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4578 1 59891400 59897255 Lja1g4578 1 59891400 59897255 ECH