Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4556 ATGGATAGGTATCAGAGGGTGGAGAAGCCCAAGGCAGATAGTCCTATCAACGAGAACGAGATACGCATTACCAGTCAAGGAAGGATGAGGAATTACATCACCTACGCCACCACTCTCCTTCAGGAGAAGGGATCTGATGAAATTGTTCTCAAAGCAATGGGACGTGCAATAAATAAGACTGTAATGATTACTGAGCTGATCAAGAGAAGGATTGTTGGTCTGCACCAGAACACTCTGATTGGATCAACTGATATAACTGACACATGGGAACCACTAGAAGAAGGCCTTCTTCCTTTGGAGACTACTCGCCATGTTTCTATGATCACAATTAACTTGTCAAAGAAAGAACTGGATACATCCTCCACAGGATACCAACCTCCTCTTCCTGCTGATCAAGTAAAACCTTTAAATGAATATGAAGAGGATGGAGAAGGCTCCCCAAGGATGCGAGGAAGAGGGCGTGGTCGTGGAAGGGGTCGGGGTAGAGGATTTTACAATAATGGGGGTATGGAATATGGTGGTGGTGATGGTTGGGACGGTGGACGTGGCTATGGTGGCAGAGGCCGTGGCTTTGGTCGTGGCAGAGGTCGTGGTTTCCGGGGACGAGGACGGGGAGGCTATGGTGCCCAGCCAGTTGGGTACTATGACTATGGTGAATATGATGCACCACCTGCCCCACGTGGACGAGGACGTGGAAGGGGAGGAAGAGGCCGTGGTCGTGGTCGTAATGCAAGCTGGGGAGTTGCTGCTTGA 753 0.4993 MDRYQRVEKPKADSPINENEIRITSQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKTVMITELIKRRIVGLHQNTLIGSTDITDTWEPLEEGLLPLETTRHVSMITINLSKKELDTSSTGYQPPLPADQVKPLNEYEEDGEGSPRMRGRGRGRGRGRGRGFYNNGGMEYGGGDGWDGGRGYGGRGRGFGRGRGRGFRGRGRGGYGAQPVGYYDYGEYDAPPAPRGRGRGRGGRGRGRGRNASWGVAA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4556 250 PANTHER RIBONUCLEASE P SUBUNIT P25 1 243 - -
Lja1g4556 250 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Lja1g4556 250 Gene3D - 14 118 IPR036882 GO:0003676
Lja1g4556 250 Pfam Alba 19 83 IPR002775 GO:0003676
Lja1g4556 250 MobiDBLite consensus disorder prediction 189 250 - -
Lja1g4556 250 MobiDBLite consensus disorder prediction 117 166 - -
Lja1g4556 250 PANTHER ALBA DNA/RNA-BINDING PROTEIN 1 243 - -
Lja1g4556 250 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4556 Lja-Chr1 59533970 59537862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4556 - - cam:101498857 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4556 1 59533970 59537862 Lja1g4556 1 59533970 59537862 ECH