Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4552 ATGGCTCTGACACAAGGAGGGTTAGTGTTCTTGTTGCTCTGCTACCTCGTTTTAGTTGGAACAGCAACAAGGGACTTGGTAATGAAGAAGCAAAACAAAAAACAAGACCTACTGTCTCTGTCTGCGAGGCTTCAAACGAGTGGTGGGGGCGAGGTTGATTGCTGGGGCTCGATGTGGGAGTTGAGATCATGCTCCAATGAGATTGTGGCTTTCTTCATCAACGGTGAGGCAGACATTGGCCCTGATTGCTGCGACGCCGTATCGGTGATAACGCGTAATTGCTGGCCTGCGATGCTCACTTCATTGGGTTTCTCTGCGGAAGAAGGTTACGTTTTGCAAGGTTACTGTGATGCTGCTGCTTCAAATCCTGCATTGGCCCCTCATGGAGCTTCGAGCTCCATTATTATTACCACTTAA 417 0.4892 MALTQGGLVFLLLCYLVLVGTATRDLVMKKQNKKQDLLSLSARLQTSGGGEVDCWGSMWELRSCSNEIVAFFINGEADIGPDCCDAVSVITRNCWPAMLTSLGFSAEEGYVLQGYCDAAASNPALAPHGASSSIIITT* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4552 138 PANTHER UNCHARACTERIZED 8 130 IPR044707 GO:0009567
Lja1g4552 138 Pfam Prolamin-like 53 117 IPR008502 -
Lja1g4552 138 PANTHER EGG CELL-SECRETED PROTEIN 1.4 8 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4552 Lja-Chr1 59456014 59456430 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4552 - - qsu:112031432 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4552 1 59456014 59456430 Lja1g4552 1 59456014 59456430 ECH