Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4551 ATGCATGCAGCAAGAAGCTGGCCGGGGGTGGACCTAACCTTTGGATTCAATGAAGTTCCTTTGAACAGCTCCAACCTTGTTATTCAGAAGCCTTATGATTTGCCTGAAAGCGCTCGCTATAGCTTTGTCTATGGAGTACACAAGCTGTGGGTGTATTCCACCGATAAACCTCACTCCGTAACTAGCAAAACCAATCCCCGAACAGAAATCCGTATTACAGGCTATGATTATTCATCCGGGGTGTGGCAATTTGAAGGGCATTTCTTTGTGCCGGATTGTACTTCCGGCGTGTGCATTATGCAAGTGTTTGGGGCAGCTCCGCCTCATGCCACCACTCTTATGCTCAGAACCTACAATGGTTCACTTTCATACTATCGGACTCCAGTTTTGGTGCCAAATATTTGGGGAAAATGGATTAAATTAAATGTGATCCATGATATTGATGCCTCAAATGTGAAGATTTACATTGATGGAGTTTTTGTTCATGAGGCGATGGGACGCAGTGGGGTCTCCCATTACTTCAAGTGCGGAGTTTACGCACAAGATGATGCTTCTTACCGTATGGAATCCCGTTGGAAAGGAATAAGAGTTCTAAAAAAATGTTTGTAA 609 0.4417 MHAARSWPGVDLTFGFNEVPLNSSNLVIQKPYDLPESARYSFVYGVHKLWVYSTDKPHSVTSKTNPRTEIRITGYDYSSGVWQFEGHFFVPDCTSGVCIMQVFGAAPPHATTLMLRTYNGSLSYYRTPVLVPNIWGKWIKLNVIHDIDASNVKIYIDGVFVHEAMGRSGVSHYFKCGVYAQDDASYRMESRWKGIRVLKKCL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4551 202 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 6 201 - -
Lja1g4551 202 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 188 IPR013320 -
Lja1g4551 202 Gene3D - 36 197 - -
Lja1g4551 202 PANTHER CITRATE-BINDING PROTEIN-LIKE 6 201 - -
Lja1g4551 202 Pfam Alginate lyase 22 197 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4551 Lja-Chr1 59416206 59417527 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4551 - - jre:108985188 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4551 1 59416206 59417527 Lja1g4551 1 59416206 59417527 ECH