Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4517 ATGACTGCTAAGATCTTCTTGCTGATTCTCCTCTTTGCAGCACACCCTCATCCTTATGCACTTGTGAATGGAGATACCACTTTGATCAAAACAACTTGCAAGAACACCAAGTACTACAGTCTCTGCTTCTCTTCCCTGAAATCAGATCCTAGCAGCCCAAATGCAGATCCTAAAGGCCTAGCTGTGATCATGGTTGGGATTGGAATGACAAATGCAACCTCCACTTCTTCTTACCTCTCTTCTAAGTTGCTAAGTCCTTCCAACAACACTACCTTGAAAAGGGTCCTCAAGGAGTGTGCAGATAAGTACACCTATGCTGGTGATGCCCTCCAAGCTTCGGTGCAGGACTTGGAAACTGAGGTGTATGACTATGCTTACATGCACATCACTGCTGCCAAAGATTACCCAAATGCTTGTCACAATGCATTCAAAAGATATTCTGATTTGGTTTATCCTCCTGAGCTTGCTCTTAGAGAAAAAGGTTTGAGGCATATCTGTGATGTGGCATTGGGGATCATTGATAATCTCAATTGGTAG 537 0.4358 MTAKIFLLILLFAAHPHPYALVNGDTTLIKTTCKNTKYYSLCFSSLKSDPSSPNADPKGLAVIMVGIGMTNATSTSSYLSSKLLSPSNNTTLKRVLKECADKYTYAGDALQASVQDLETEVYDYAYMHITAAKDYPNACHNAFKRYSDLVYPPELALREKGLRHICDVALGIIDNLNW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4517 178 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Lja1g4517 178 CDD PMEI_like 33 175 - -
Lja1g4517 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 176 - -
Lja1g4517 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 176 IPR035513 -
Lja1g4517 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 176 IPR035513 -
Lja1g4517 178 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 8 176 - -
Lja1g4517 178 SMART PMEI_2 24 172 IPR006501 GO:0004857
Lja1g4517 178 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 176 IPR006501 GO:0004857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4517 - - gmx:100306461 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4517 1 58847296 58848065 Lja1g4517 1 58847296 58848065 ECH