Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4513 ATGGAGGAAGCCACAGTGTTAATTGTAGGTGCTGGTCCTTCAGGCCTTGCAATTTCAGCATGCCTCACACAAAACTCTATTTCTCATATAATCCTTGAGAAAGAGGATTGCTCTGCTTCTCTTTGGAGAAAAAACACTTATGATCGTTTAAAACTTCATCTTGCTAAGGAGTTTTGCTTTCTACCATTCATGCCTCACCCACCTTCAAGCCCAACATTTCTCTCCAAATCAGACTTTGTTCAGTACATTGACAGATATGTTGAGCATTTCGACATCAACCCTCGTTATTGTCGTTCGGTGGAGTCTGCTTCTTATGATGAAGGTGGAAACAAGTGGAGGGTTGAGACGAACAATACGAGGGAAGGGAAGGTGGAGACTTATGAGGCGAAGTTTCTTGTGATTGCATCGGGCGAAAATAGTGAGTGTTACATTCCTGATCTTCAAGGTCTTGGAAGCTTTGAAGGAGAGACTGTGCACTCTAAATACTACAAACGTGGTTCATACTATAAATCTAAGAGAGTTTTGGTTGTTGGGAGTGGTAACTCAGGAATGGAGATTGCTTATGATCTCTGTAACTGGGGTGCCACCACTTCCATTCTCATTCGTAGCCCGCTTAATGTGATCACCAAAGAATTGATCCATCAAGGCATGCGAATGGTGAAATATTTGCCTGTCCAAGTTGTGGATAAAGTCATTACATTCTTGGGAAACCTTAAATATGGGGATCTAACACAGTTTGGGATTTATCAACCCAAACATGGACCATTATATGCCAAGTACCTTACTGGGAAATCTGCAGTCATTGATGTTGGAACTGTTGGAAAGATTAAAGAGGGAGAAATAAAGATCATTCCTTCAAATATAAAGAGAATTGAGAAAAACAAGGTGGTCTTTGCAAATAATATGGAAAAAGAGTTTGATGCGATTGTGTTTGCTACTGGTTATAGAAGTGTAGCTCATAAATGGCTTAAGGATTACAACTATATTCTAAATGAATATGGGATGCCAAAAAATGATTACCCAAACCACTGGAAGGGAGATCATGGGTTGTACTGTGGAGGATTAGCAAGAAGAGGCTTATGGGGAGTCAAAATGGATGCTGAGGCTATTGCTGAGGACATTACCCAATCTTTGAAGCAAGACCAGTGA 1149 0.4064 MEEATVLIVGAGPSGLAISACLTQNSISHIILEKEDCSASLWRKNTYDRLKLHLAKEFCFLPFMPHPPSSPTFLSKSDFVQYIDRYVEHFDINPRYCRSVESASYDEGGNKWRVETNNTREGKVETYEAKFLVIASGENSECYIPDLQGLGSFEGETVHSKYYKRGSYYKSKRVLVVGSGNSGMEIAYDLCNWGATTSILIRSPLNVITKELIHQGMRMVKYLPVQVVDKVITFLGNLKYGDLTQFGIYQPKHGPLYAKYLTGKSAVIDVGTVGKIKEGEIKIIPSNIKRIEKNKVVFANNMEKEFDAIVFATGYRSVAHKWLKDYNYILNEYGMPKNDYPNHWKGDHGLYCGGLARRGLWGVKMDAEAIAEDITQSLKQDQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4513 382 Coils Coil 376 382 - -
Lja1g4513 382 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 204 - -
Lja1g4513 382 Gene3D - 1 381 IPR036188 -
Lja1g4513 382 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 379 - -
Lja1g4513 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Lja1g4513 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Lja1g4513 382 SUPERFAMILY FAD/NAD(P)-binding domain 167 360 IPR036188 -
Lja1g4513 382 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED 3 379 - -
Lja1g4513 382 PIRSF FMO 2 335 IPR000960 GO:0050660|GO:0050661
Lja1g4513 382 SUPERFAMILY FAD/NAD(P)-binding domain 5 207 IPR036188 -
Lja1g4513 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Lja1g4513 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4513 Lja-Chr1 58812496 58814594 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4513 K11816 - gmx:100778306 570.081