Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4506 ATGCCGATCGAAATGCCCAGAGGTTTACCTTTCTCCGTCGACACATGGAGTAGTTCATCTTCATCGTCGAAGCGCCACCATTTCCTCACACACGCTCACAAAGACCATTCCTCCAACATAGCTTCCCACTTCTCCTCTTCCTCTTCCCCAATTTACTCCACGCTTCTCACCAAAACCCTTCTCCTTCAACAATTTCCCCAGCTAGATGCATCCTTGTTTCTGGACATTGAGGTAGGCCAGTCATTGATAATCGACGATCCTTCTGGCGCCTTCACGGTTACCGCTTTCGACGCCAATCACTGCCCTGGGGCTGTGATGTTCTTGTTTGAAGGAAAATTTGGTAACATTCTGCACACAGGAGATTGCAGGTTTACCACTGAGTGTCTCCTCAACTTGCCTCACAAGTATGTTGGCAAGAAGGGGAAGGAGCCGCGTTGTCCTCTTGATTGTGTCTTCTTAGACTGTACTTTTGGAAATTTCTCTCGCGCCATGCCTACTAAGCCTTCTGCTGTTCAACAGGTTCTTAATTGTATATGGAAGCATCCTGATGCAACAAGAGTGTATCTTATCTGTGACATTCTCGGACAGGAAGAGATCCCTGTTAACGTGTGTCAAATATTTGGAGGCAAGATATATGTTGATAAAGCTAAAAATCCTGAATGTTTCAAGAACCTAGCACTTATAGCGCCTGAAATCCTTTGTGAAGATCCATCCTCTCGTTTTCATTTGTCTGACGGATCTCCAGGACTATATGAAAGAGCAAGAGCAAAGCTGGTTGAGGCCAAGGCAACTCTTCAACCAGAACCTCTCATTATCCGCCCTTCGGCACAGTGGTATGCTTGTGAAGAAGGGTTCTCTGATATTGAAAACGCTAAAAAAAAGAGGACCAGTGAAGCAGTTAAGGATCAGTTTGGTGTTTGGCATGTGTGTTACTCAATGCACTCATCCAGGGAGGAATTGGAATGGGCGCTTCAACTTCTTTCACCAAGGTGGGTTGTTTCAACAACCCCCAGCTGCAGGGCTATGGAGCTGAACTATGTTAAGAAACACTGCTTTAAGTCTAAAGCAGCTCTCAATAACTCTGTATTGAAGCTTCTGGATATGACTGTGGAGACTTCTGATAATGTGGAGGCATTGGTCAAATCTGTAAGCTGTTTTCCTGTGCTTGAAGGGATCCCTCAGCCTTGTGTGCAAACTAAATCACCCGTCAAACACTGCACTGAGGCTAAAGCACCGGAAGAATTGCCTCTACCTGGCAAACGCTTGCCTGTCACATTATTTGGAAGAGCAAGGCTCGGTCTCCAGGATATTACCTTTTCACAAGGGAGTAATATTTTGCCAGTTAATGCCCTTTCGGAGGAAGTTTCAAGTGATGCACCACAAGAATTCTTGGATAATGTGGAGAATGATGAAGTGAAATGCGATAGGTCACTGGAAAGAAAGGAAGATTCACATCCAGTGAAGAAGTATCAATGGGAGAGGTCACAGGAAAGAGAGGAAGACTCTTATCTAGTGAAGGAGTATAAGCAATCCGAGGTTCAGGAAGACACAAGATTTCATAAGAGTGCCTCCTATTCAGATACTAGATCCTCAGGCTTGAGTGAAAGTGTCAGAAAGTTGTATAGGTCAATGAACATTCCTGTGCCTCAACCTCTTCCCTCCTTGGTGAGTCTTATAAATTCCAATAAACGTTTCAAGAGGTGA 1704 0.4478 MPIEMPRGLPFSVDTWSSSSSSSKRHHFLTHAHKDHSSNIASHFSSSSSPIYSTLLTKTLLLQQFPQLDASLFLDIEVGQSLIIDDPSGAFTVTAFDANHCPGAVMFLFEGKFGNILHTGDCRFTTECLLNLPHKYVGKKGKEPRCPLDCVFLDCTFGNFSRAMPTKPSAVQQVLNCIWKHPDATRVYLICDILGQEEIPVNVCQIFGGKIYVDKAKNPECFKNLALIAPEILCEDPSSRFHLSDGSPGLYERARAKLVEAKATLQPEPLIIRPSAQWYACEEGFSDIENAKKKRTSEAVKDQFGVWHVCYSMHSSREELEWALQLLSPRWVVSTTPSCRAMELNYVKKHCFKSKAALNNSVLKLLDMTVETSDNVEALVKSVSCFPVLEGIPQPCVQTKSPVKHCTEAKAPEELPLPGKRLPVTLFGRARLGLQDITFSQGSNILPVNALSEEVSSDAPQEFLDNVENDEVKCDRSLERKEDSHPVKKYQWERSQEREEDSYLVKEYKQSEVQEDTRFHKSASYSDTRSSGLSESVRKLYRSMNIPVPQPLPSLVSLINSNKRFKR* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4506 567 Gene3D - 9 335 IPR036866 -
Lja1g4506 567 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 567 - -
Lja1g4506 567 Pfam DNA repair metallo-beta-lactamase 232 339 IPR011084 -
Lja1g4506 567 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 567 - -
Lja1g4506 567 Gene3D - 163 314 - -
Lja1g4506 567 SUPERFAMILY Metallo-hydrolase/oxidoreductase 26 343 IPR036866 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4506 K15340 - gmx:100807948 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4506 1 58629149 58632156 Lja1g4506 1 58629149 58632156 ECH