Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4505 ATGGCGTTCTCTGTGTCTCTCTTCCACACCTCAATCCCTTCTCTTCTTAACTCACCACAAACGTTGAGAAGGAAACATGCCCATTTCCCATTGATTCGTGCAGTGCAAGCTGGTGAACCAGAAAACCCAAAAACCAAGAGTGAAAGTTCCTCTGCCTCTGGTGCAGGTGCAGCTCAGTCTTCGAATGCAGCTGCTCCTAAGATCCCCAAGAAACCTGTTTATTCCATGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCACTAGCATCAATTATCTTTCTGTTGGGCATCCACCTTATTACAAAGGATTAGACTATATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGTGTATTTGACACAGGAGAGCATGCACTTATTGCATGGGTAGGAATCCCTACTGCTCCAGCTTGGCTTCCTACATACATGCTTATCAAGTCTGAGAAGCTTGATTATGAGAGGATATGA 480 0.4479 MAFSVSLFHTSIPSLLNSPQTLRRKHAHFPLIRAVQAGEPENPKTKSESSSASGAGAAQSSNAAAPKIPKKPVYSMKKGQIVRVDKEKYLTSINYLSVGHPPYYKGLDYIYEDRGEVLDMRVFDTGEHALIAWVGIPTAPAWLPTYMLIKSEKLDYERI* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4505 159 MobiDBLite consensus disorder prediction 42 60 - -
Lja1g4505 159 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 159 - -
Lja1g4505 159 Pfam Cyanobacterial and plant NDH-1 subunit O 76 150 IPR020905 GO:0005886|GO:0016655
Lja1g4505 159 MobiDBLite consensus disorder prediction 34 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4505 - - gmx:100500669 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4505 1 58627245 58628944 Lja1g4505 1 58627245 58628944 ECH