Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4472 ATGAACGATTTCGACGGCCTGTTAGGTACCGAATTCGGGTTCAAACCCCGAGGCAAATCAGTTCCAATGGCTGGATCCTCCAACTTCACAACCACCACTTCTTCTACTTCCTCCGTCAACTTCGATTTAGGTCCTCAATCTTCTTCCAGTTCCACCAAAACCCCCTCCGCCGATCTCGACTCGGTTTTCCGGGCCAAGTCCGTCAACTTTCCTGTCTACGACGACGACATTTTCGACGGCGTCCCCGGTCTCAGAACCTCCTCCTCCTCCAAACTCCCATCCTACGACGACGTTTTCGCTTCTCCGGGAGAGGCCACCGCCTTCGACGATCTTCTCGGCGGCTTCGGTCAATCCAAGAGCTCGCGGAAGGAATTGCATGATGATGATAAAGGTGGTTCCGCCGATTTCGATGACTTGATCCCTGGATTCGGGAGCAGTACTACTACCAAGGCTTCCACTGAAACTGAAAGGCCCAGTCCTGATATTGGTTTTTCATCAGAATCTACTGTCAATGCATCTAAAATGGCCTCCAGTGCAATGGAAGACCCTTTCAAAGTATTTGAATCAGCTTCAGCTCCAATAGACTCATCCTCAGGGCACTTTACAGACCCATTGGACGAAATTAGTAAATTTACTAGTTCTAGAAGCACAAGAAATGATAAGTCATCAAATTCTAATGGTGTAGTATATGATGATACTGATCATTTCGATGTACTTGGAAATTCAGTACCAGCATTCTCATCAGAGAGAAATAGCAGGCAGGGCAGCAGTTCCCCAACACCACGGTCAAACACAAGTTCAAGTTGGACTGGAGATAAAGAATCATTTGACAAATCGTCTGTGAGGAGTCCTGAGACACAGACACAAAACAAGATTCCTGTTGAACATGATCAGGAGTTTCATCAGGCTCCATATGACATGCCTACATATTCAACAGATTCTACTCAACCAGCTGGCCAAAGGTCTACATCCCCTTCTTATGATGATGATGGTTTGAGACATGTCAATACTCAGGCGGATATGTCTCCAAGATATGAAGAAAATTTGAACTCAAATGATGATATATGGCTGGTGGTATCGGAGATTCCTCTTTTTACACAACCAACTGCTGCTCCACCACCTTCAAGACCACCTCCTCCCCGACCAGTACATATCCCCAAATCTGGAACAAGTTCATCAGCCTCTGCCAATGCCAGAAAGAAAGATAATGAATTTTCTTCTTTCCCAAGCTCCACTCGGTTTTCTCAGAATCCTAAATCAGCTCCTGCTGCAACCAAGTTTTCTTCTGCATCTCAGTTTGATGAAGTTGAAGATTTTGCCATGGGTAAAAGTCATTGTAATGACACTCAACATGGAAATGGTCTTCCTGATGAAGAAATAGAGATGAACTCAGCTGCCGCAGCTATGAAGGAGGCTATGGATAGAGCTGAAGCTAAGCTTAGGCATGCAAAGGAGGTTAGGGAGAGAGAGAATACGAAAGCTGCAAGAAGCAAAGAACATGTGCAAGTGGAAAGTGACAGTGCTGAGCCTGAGGAGAGAGGAAATAAGGAATGGTTAGACCACGAGTGGCTGCAAAAGGAGAGGGAGGAAAACGAGCAAAGAAAACTTCAGATGGAAAGGGAGGAGAAAGAAAGAGAGCAGAGACTTGAGAGCGAAAGACAAAAGGCAAGACAGGCTGTAGAAAGAGCTACGAGAGAAGCGCGTGAAAGAGCAGCTGCTGGAGCTCGCCAAAGAGCTGAGAGGGCTGCAGTCGAGAGAGCTAATTCAGAAGCTAGAGGGCGTGCTGAAAGGACTGCAGTTCAGAGGGTACAAGCAGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGGTAAGAGCTGAAAAAGCTGCTGCACAGGCAAAGGAGAGGGGAACGCGAGTAAAAGTAACTGCTTCTGACGCACGAATTAAAGCTGAACGTGCTGCTGTTGAAAGGGCTACTATGGAGGCCCGAGAAAGAGCTGCAGCTTCTACAAGGATGAGCCAACAAAAGAATGAAAATGATTTTGAGTCATTCTTCAGCACAGATGCACGAGCCAATAGTGCTCCAAGGCCTCCTAGAGCTAGCTCTTCAGATTCTGCATTTGATTCCCAATTTCAGTCAGATGTAACCCGGAAATCTACAAGTACATCTTCAAACATGAAGAAAGAATCATCATCCACTAATATTGTTGATGATCTCTCCTCAATTTTTGGAGCTTCTCCGTCACCTAGAGAATTCCAGGAAGTTGAAGGGGAAAGTGAAGAAAGGCGAAAGGCCAGGTTGGAACGCCTTCAAAGGGCTCAGGAGCGTGCGGCAAAAGCATTGGATGAGAAGAATCAACGGGACCTACAAACTCAAAGAGAGCAAGCTGAGAGACATAGGCTTGCTGAAACACTGGATTTTGAAGTTAAGCGCTGGGCTGCAGGAAAAGAGGCGAACTTGCGTGCTTTGCTTTCCACGTTACAATATGTACTGTGGTCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGACTTGATAACAGCCGCGGCTGTTAAAAAGGCTTACAGGAAAGCTACATTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAACAGAAATATATTGCAGAAAAGGTGTTTGATTTACTCAAGGAAGCATGGAATAAGTTCAACTCAGAGGAGCTTTTCTAA 2685 0.4611 MNDFDGLLGTEFGFKPRGKSVPMAGSSNFTTTTSSTSSVNFDLGPQSSSSSTKTPSADLDSVFRAKSVNFPVYDDDIFDGVPGLRTSSSSKLPSYDDVFASPGEATAFDDLLGGFGQSKSSRKELHDDDKGGSADFDDLIPGFGSSTTTKASTETERPSPDIGFSSESTVNASKMASSAMEDPFKVFESASAPIDSSSGHFTDPLDEISKFTSSRSTRNDKSSNSNGVVYDDTDHFDVLGNSVPAFSSERNSRQGSSSPTPRSNTSSSWTGDKESFDKSSVRSPETQTQNKIPVEHDQEFHQAPYDMPTYSTDSTQPAGQRSTSPSYDDDGLRHVNTQADMSPRYEENLNSNDDIWLVVSEIPLFTQPTAAPPPSRPPPPRPVHIPKSGTSSSASANARKKDNEFSSFPSSTRFSQNPKSAPAATKFSSASQFDEVEDFAMGKSHCNDTQHGNGLPDEEIEMNSAAAAMKEAMDRAEAKLRHAKEVRERENTKAARSKEHVQVESDSAEPEERGNKEWLDHEWLQKEREENEQRKLQMEREEKEREQRLESERQKARQAVERATREARERAAAGARQRAERAAVERANSEARGRAERTAVQRVQAEARERAAAEAKVRAEKAAAQAKERGTRVKVTASDARIKAERAAVERATMEARERAAASTRMSQQKNENDFESFFSTDARANSAPRPPRASSSDSAFDSQFQSDVTRKSTSTSSNMKKESSSTNIVDDLSSIFGASPSPREFQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQREQAERHRLAETLDFEVKRWAAGKEANLRALLSTLQYVLWSECGWQPVSLTDLITAAAVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKEAWNKFNSEELF* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4472 894 MobiDBLite consensus disorder prediction 305 331 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 23 58 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 244 274 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 472 603 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 646 759 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 192 347 - -
Lja1g4472 894 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 622 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 662 735 - -
Lja1g4472 894 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 622 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 118 179 - -
Lja1g4472 894 Coils Coil 521 569 - -
Lja1g4472 894 Gene3D DnaJ domain 762 893 IPR036869 -
Lja1g4472 894 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 666 893 - -
Lja1g4472 894 SUPERFAMILY Chaperone J-domain 728 892 IPR036869 -
Lja1g4472 894 MobiDBLite consensus disorder prediction 386 432 - -
Lja1g4472 894 ProSiteProfiles dnaJ domain profile. 829 893 IPR001623 -
Lja1g4472 894 MobiDBLite consensus disorder prediction 367 385 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 120 135 - -
Lja1g4472 894 CDD DnaJ 841 886 IPR001623 -
Lja1g4472 894 MobiDBLite consensus disorder prediction 1 58 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 207 230 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 366 603 - -
Lja1g4472 894 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 666 893 - -
Lja1g4472 894 Coils Coil 466 493 - -
Lja1g4472 894 Coils Coil 757 784 - -
Lja1g4472 894 MobiDBLite consensus disorder prediction 142 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4472 Lja-Chr1 58129334 58141074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4472 - - gmx:100777111 1039.64