Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4471 ATGGTGAAGGACTCCATAGATGGTTTCTCTTCACTGCCCGACTCCAAATTCTATGATGATGATGGCCGTCCTAAACGAACAGGAACCGTTTGGACTACAAGCTCCCACATAGTAACCGCTGTTGTAGGATCTGGGGTGCTGTCTTTAGCATGGGCAATAGCTCAAATGGGTTGGGTTGCTGGTCCTGTAGCGCTGATCATCTTCAGCAGCATTACTTGGTACACTTCATTGCTTCTAGCTGAATGTTATCGTTTAGGAGACCCCATTTCCGGAAAAAGAAACTATTCTTTCATGGATGCAGTTCAGAACATTCTTGGTACTACCAGTGCTAAGATTTGTGGGATAGTCCAGTACTCGAGTCTTTACGGCGCTGCAATAGGATACACAATCGCAGGTGCCATTAGTATGATGGCAATAACAAGGACTAACTGTCTCCATTCTTCAGGCGGAAAAAACCCATGTCCCATAGATAGCAACCCATACATGATCGGTTTTGGAGTAAGCCAAATTTTCTTATCTCAAATTCCAGATTTTCCTCAAACATGGTGGCTCTCAATTGTTGCAGCAATCATGTCTTTCACTTATTCCTTTATTGGTCTCTTCCTGGGAATTGCTAAAATTTCAGAGAATGGTACCATCAAGGGTAGTCTCACAGGAGTTACCATTAGAACTGTGACAAAAATTGAAAAAGTGTGGGGGATTTTCCAATCTTTTGGTTGCATAGCCTTCGCCTATTCGTTCTCTCAAATTCTCATTGAAATTCAGGACACCATAAAAAACCCACCATCTGAAGTGAAAACAATGAAGAAGGCCACAAAGTTAAGCATTAGTGTTATCACAGTATTTTACATGCTTTGTGGGTGCTTTGGCTATGCTGCTTTTGGAGACGCAGCACCTGGGAATCTCCTCACTGGATTTGGCTACTCTAACGCATATTGGCTTATAGACATTGCTAATGCAACAATCCTAGTTCACATGTTTGGAGCGTACCAAGTGTATGTCCAACCCCTCTTTGCATTTATTGAGAAAGAGGCAGTAAAAAGGTGGCCATCAGTTAACAAGGAATACAAGATTCCAATTCCTGGTTTTGCTCCTTATAATCTAAACTTGTTTAGATTGGTTTGGAGAACACTGTTTGTTATCTCAACCACTTTCATAGCAATGTTGATTCCATTCTTCAATGACGTTTTGGGGATCCTTGGATCACTGAATTTTTGGCCTTTGACTGTTTATTTCCCAGTGGAGATGTATATAAAGCAGAAGAAGATCCCAAAATGGAGTAGGGCATGGATTGGTCTGCAAATTATAAGTGTAGTTTGCCTTGTAGTGTCAGTTATGTCTGCTATTGGCTCAGTGGCCAGTGTAGCGCTTGACTTAAAGGTTTACAAACCTTTCGTCACAAACTTTTAA 1410 0.4149 MVKDSIDGFSSLPDSKFYDDDGRPKRTGTVWTTSSHIVTAVVGSGVLSLAWAIAQMGWVAGPVALIIFSSITWYTSLLLAECYRLGDPISGKRNYSFMDAVQNILGTTSAKICGIVQYSSLYGAAIGYTIAGAISMMAITRTNCLHSSGGKNPCPIDSNPYMIGFGVSQIFLSQIPDFPQTWWLSIVAAIMSFTYSFIGLFLGIAKISENGTIKGSLTGVTIRTVTKIEKVWGIFQSFGCIAFAYSFSQILIEIQDTIKNPPSEVKTMKKATKLSISVITVFYMLCGCFGYAAFGDAAPGNLLTGFGYSNAYWLIDIANATILVHMFGAYQVYVQPLFAFIEKEAVKRWPSVNKEYKIPIPGFAPYNLNLFRLVWRTLFVISTTFIAMLIPFFNDVLGILGSLNFWPLTVYFPVEMYIKQKKIPKWSRAWIGLQIISVVCLVVSVMSAIGSVASVALDLKVYKPFVTNF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4471 469 Pfam Transmembrane amino acid transporter protein 26 455 IPR013057 -
Lja1g4471 469 PANTHER OS05G0424000 PROTEIN-RELATED 3 463 - -
Lja1g4471 469 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4471 Lja-Chr1 58126121 58128719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4471 13 469 Organic Solute Cotransporters AT5G09220 65.510 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4471 K24917 - gmx:100816507 709.909