Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4470 ATGATTGAAAACTCTTTCAGAACCAACCTGCTGAGCCATCCTCAAGGTTTTGACATGGTGAAGGACTCCATAGATGGTTTATCTTCACAGCCGAACTCCGAATCCCACGACGATGATGGCCATCTTAAACGAACAGGAACTCTTTGGACTACAAGCTCCCACATAGTAACCGCCGTTGTAGGATCTGGGGTGCTGTCTTTAGCCTGGGCCATAGCTCAAATGGGCTGGGTTGCTGGTTCTGTAGTGATGATCTCCTTCAGCATCATCACTTGGTACACTTCATTACTTCTAGCTGACTGTTATCGTTATGGAGACCCCATTTTCGGAAAAAGAAACTATTCTTTCATGGATGCAGTTCAGAACATTCTTGGTACTCGCTACGCTCAGATTTGTGGGATAGTCCAGTACTCGAGTCTTTACGGCGCTGCAATAGGATACACAATTACGGCTGCCATTAGCATGATAGCAATAACAAGGACAGACTGCCTCCATTCCTCAGGCGGAAAAAACCCATGTCCAATTTCAAGCAACCCATACATGATCAGTTTTGGAGTAAGCCAAGTTTTCTTTTCTCAAATTCCAGATTTTCATCAAACATGGTGGCTCTCAATTGTTGCAGCAATCATGTCTTTCACATATTCCTTAATTGGTCTCTATCTGGGAATTGCTAAAGTTGCAGAAACGGGTACCATCAAGGGTAGTCTCACAGGAGTTAGTATTGGAATGGTGACAAAAGCTGAAAAAGCATGGGGAGTGTTCCAAGCTCTTGGTGACATATCCTTCGCCTATACATTCTCTCAAATTCTCATGGAAATTCAGGACACCATTAAAACCCCACCATCTGAAGTGAAAACAATGAAGAAGGCCACCCATATAAGCATTGGAGTTATCACAGCATTTTACATGCTTTGTGGGTGCTTTGGCTATGCTGCTTTTGGAGACACAGCACCTGGTAATCTGCTAACTGGATTTGGCTACTCCAAATCATATTGGCTTATAGACATTGCTAATGCAGCAATTGTAGTTCACATGTTTGGAGCATACCAAGTGTATTCCCAACCCCTCTTTGCATTTGTTGAGAAAGAGGTAGTAAAAAGGTGGCCATTAGTTAACAAGGAATACAAGATTCCAATTCCTGGTTGTGCTCCTTATAATCTAAACTTGTTTAGATTGGTTTGGAGAACAATGTTTGTTATCTCAACCACTTTTATAGCAATGTTGATTCCATTCTTCAATGACGTTATGGGGATCCTTGGAGCTCTGAATTTTTGGCCTTTAACAGTTTATTACCCAGTGGAGATGTATATCAAACAGAAGAAGATGCCAAAATGGAGTAGGAGATGGATTTTTCTGCAAATTATAAGTGTAGTTTGCCTTGTAGTGTCAGCAGTGTCTGTTGTTGGCTCAGTGGCTAGTGTAGTTCTTGACCTGAAGAAGTACAAACCTTTTGTCTCAAACTTTTAA 1464 0.4173 MIENSFRTNLLSHPQGFDMVKDSIDGLSSQPNSESHDDDGHLKRTGTLWTTSSHIVTAVVGSGVLSLAWAIAQMGWVAGSVVMISFSIITWYTSLLLADCYRYGDPIFGKRNYSFMDAVQNILGTRYAQICGIVQYSSLYGAAIGYTITAAISMIAITRTDCLHSSGGKNPCPISSNPYMISFGVSQVFFSQIPDFHQTWWLSIVAAIMSFTYSLIGLYLGIAKVAETGTIKGSLTGVSIGMVTKAEKAWGVFQALGDISFAYTFSQILMEIQDTIKTPPSEVKTMKKATHISIGVITAFYMLCGCFGYAAFGDTAPGNLLTGFGYSKSYWLIDIANAAIVVHMFGAYQVYSQPLFAFVEKEVVKRWPLVNKEYKIPIPGCAPYNLNLFRLVWRTMFVISTTFIAMLIPFFNDVMGILGALNFWPLTVYYPVEMYIKQKKMPKWSRRWIFLQIISVVCLVVSAVSVVGSVASVVLDLKKYKPFVSNF* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4470 487 PANTHER OS05G0424000 PROTEIN-RELATED 20 481 - -
Lja1g4470 487 Pfam Transmembrane amino acid transporter protein 45 474 IPR013057 -
Lja1g4470 487 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 20 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4470 Lja-Chr1 58111329 58113777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4470 15 487 Organic Solute Cotransporters AT5G09220 64.151 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4470 K24917 - gmx:100816507 717.613