Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4454 ATGGTTAAGGTATCAATGTTGCATTCAACATCACAAACAGTGAGTCTATGTAAACAGAGAAAGGAGATTATTAAAGCTGCTAAGTGTTGTAGGTATGATTTAGTCACAAACTTTGTGTTGTACTTGGATTCACTTTTGGTGCTAGGAAATTCCCTCAACAACTACGTGGAGAAAGAGTTGCTGATTTATGATAATTGCTGTGGCCACTTGGAGTTTTCCTCTTCCTCTGACTCTGATTCTGATTTGGATTCTTTGCTTCACCATGTTGATGAGGAAGAACCAGTAAGCATTCATCATATGTTGGAAGTGGAGGACGAATCCAGCACTAGCGACGACGAGGAGATAGAGGGAGCCCAAAGCACGAGCACAAGCACTGAGGAGTCAACACCGAAGACTGCCAGTCCCCGGATTCGCAAGAACAATACTCATATTCCCATGTCACATGGAGATTTTGGACACCATGAGCATAGTCAAGAGATGGAAACTTTGGGAACTCCAATGTATTATTTTTCCCACTACAATGAAATGTATGCGCATTATAGTACTGAGGCATTTCCAATGGGTGTACCTGTAGTTGTACCCCCAAGTCATGATGATCCAATGTCTCAAATGCATGGACCTAAGAAGAATAACACTGTTACTCCCTTACCTACTCCAGCCCCACCTGAAAACTCTACATGGGATTTCTTATATCCATTTAGCATGAATAATGATGTTTCATATGAACATGATCTGGATGAGAGGGAAATAAGGAAAAGAGAAGGGATTCCTGATTTAGAAGAAGAAAGTGGTGAGAAAAGTAAAGAAAGTGAAGAAACTTTTCATTCAACCATGGGAGTTTTTTACCAGAAGGAAATGGATAGTGGAATAAGGCTTGGCTCAGGTGATGAAAATGGAACAAGGCTTGGCTCAGGTGATGGAAATGGAACAAGGCTTGGCTCAGGTGATGGAAATGGAACAAGGCTTGGCTCAGGTGATGGAAATGGAACTAGGCTTGGCTCAAGTGATGGAAATGGAACTAGGCTTGGCTCAGGTGATGGCACTTCCAATGTTACACAGTCAAATGCTAAAAAGGGTGCATTTTCAAACAAAGGTAAAGAGCTTATCATTATGGTTAGGGGAGAAACAAATGAGAAGAAGTGTGACTTGGGGCCTAAGACAAAAGGGCAGGACACTGAATCTTCTGAAACCAGTCTTCAGGAAGCAGTGGTGGATATAAGGAACCAATGCAAGTATCTAGTTGATTGTGGAAAAGAATTCTCATCAGTTATAGAGGTGGCAAAGCGACAGCATCATTCTGCAAGCACCAAATTAAAGGACTTTGCTTCTTCTGTCCTGGGGTTGATAATTCCTTCAGCAAAAAGGTGTTTGTACCCTTCACACATGTCATACCAACCAGCTCCTAAAGCAAGGTTGTTGTCCAAGGCTGATATGAAAAGCAATCAAGATCATGAAACATCAAGTGACCTTTTATCAACATTGGAGAGGCTTCATGTCTGGGAGGATAAACTCTATAGAGAAGTAAAGGGTGAAGAAAAACTTGGAATTCTCTATGATAAGCAGTTCAAGAGACTAAAGGAAATGGATGATAAAGGTTTTGACCCAGATCAGATTGATGATGCTCTTGCTGCTTTTAAACTACTAAATTCAGAAATGAAAGTAGCTGTTACATCAATCAGTGCAAAATCAAGAGAGATACATGAGTTGAGAGATAATAAGCTGCTTCCTGAACTGAATAAATTGATTGATGGCTTAACAAGATTGTGGACCGTCATGAATACATGCCATCAGAAACAATTCAAAGCTATCAAAAATGCCAAAAGTCATGTTCACATACTAGGTCCTGGGAACATGAAAAAAAAATCAAGCTCAAAAGGTACTTTGAGACTGGAAAAGGTGATCTTGAATTGGGGAATGTGCTTCAGAAACTTCATCAACACACAGAAGACCCTTGTGAAACACTTACATAACTGGCTTCTGAGGTTCATTCTTGAATCAACTAAAGATGGGACTAATCCTCTCTTGCCAAGTGATGCAGAAGCTCCTCCTATTTTCAGAGTTTGCAACAATTGGTACCAAGCAATTGACAAAATTTCAGAAGTTAAAGTCTCTGAAGCCATTAGTACTTTTGCCTCAAGCTTGCACCAGTTATATGTGAAACTGAAAGAGGAAAAGAAATTAAAAGCTAAACTGAATAAACTTGTACAGAATTATCAGCACCAGCTTCAACCTTTTTGTGATGAGAATGGTAACAACGCTAAGAAGTGTGACTCTTTTATCAAAATGAAACCCTCAGAAATTTCTATACTGGATGATATTCCAAAACTGAGAGTTTTTGATGAAGATTTAGCAAATTCAAGGAGAAGACTGGTTGAATTGAGAAAGAAGCACCATGAAGTTTTTCTGCATGTTAATGATGTTGCTTCAAGTTTCTTACATGAGGGTCTCACTCCCATCTTTGATGCTTTGCAGAGCTTCTGTTTAGAAAATCTGAGAGTATATGAGCAGCTCAGACTTCCAAGCTCTGGTAATGGCACCGATGGATAA 2547 0.3977 MVKVSMLHSTSQTVSLCKQRKEIIKAAKCCRYDLVTNFVLYLDSLLVLGNSLNNYVEKELLIYDNCCGHLEFSSSSDSDSDLDSLLHHVDEEEPVSIHHMLEVEDESSTSDDEEIEGAQSTSTSTEESTPKTASPRIRKNNTHIPMSHGDFGHHEHSQEMETLGTPMYYFSHYNEMYAHYSTEAFPMGVPVVVPPSHDDPMSQMHGPKKNNTVTPLPTPAPPENSTWDFLYPFSMNNDVSYEHDLDEREIRKREGIPDLEEESGEKSKESEETFHSTMGVFYQKEMDSGIRLGSGDENGTRLGSGDGNGTRLGSGDGNGTRLGSGDGNGTRLGSSDGNGTRLGSGDGTSNVTQSNAKKGAFSNKGKELIIMVRGETNEKKCDLGPKTKGQDTESSETSLQEAVVDIRNQCKYLVDCGKEFSSVIEVAKRQHHSASTKLKDFASSVLGLIIPSAKRCLYPSHMSYQPAPKARLLSKADMKSNQDHETSSDLLSTLERLHVWEDKLYREVKGEEKLGILYDKQFKRLKEMDDKGFDPDQIDDALAAFKLLNSEMKVAVTSISAKSREIHELRDNKLLPELNKLIDGLTRLWTVMNTCHQKQFKAIKNAKSHVHILGPGNMKKKSSSKGTLRLEKVILNWGMCFRNFINTQKTLVKHLHNWLLRFILESTKDGTNPLLPSDAEAPPIFRVCNNWYQAIDKISEVKVSEAISTFASSLHQLYVKLKEEKKLKAKLNKLVQNYQHQLQPFCDENGNNAKKCDSFIKMKPSEISILDDIPKLRVFDEDLANSRRRLVELRKKHHEVFLHVNDVASSFLHEGLTPIFDALQSFCLENLRVYEQLRLPSSGNGTDG* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4454 848 MobiDBLite consensus disorder prediction 104 158 - -
Lja1g4454 848 MobiDBLite consensus disorder prediction 114 141 - -
Lja1g4454 848 Pfam Protein of unknown function (DUF632) 399 715 IPR006867 -
Lja1g4454 848 Coils Coil 721 741 - -
Lja1g4454 848 MobiDBLite consensus disorder prediction 289 358 - -
Lja1g4454 848 Pfam Protein of unknown function (DUF630) 11 59 IPR006868 -
Lja1g4454 848 PANTHER UNCHARACTERIZED 11 841 - -
Lja1g4454 848 PANTHER BNAA10G08300D PROTEIN 11 841 - -
Lja1g4454 848 Coils Coil 776 796 - -
Lja1g4454 848 MobiDBLite consensus disorder prediction 301 358 - -
Lja1g4454 848 MobiDBLite consensus disorder prediction 246 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4454 Lja-Chr1 57910405 57914343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4454 492 717 Acyl Lipid Metabolism Gene Families AT2G27090 33.188 1.14e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4454 - - lang:109326294 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4454 1 57910405 57914343 Lja1g4454 1 57910405 57914343 ECH