Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4401 ATGCAATTAGATTTTCTGCAAAATGGAATGGATTTCTCTCCAGGAAAAAGTCTGGATGGGAGTTTCAGGAAGTCTAGCTCTGTTATTTCTACTAGTAATGTCTCTGAGACCTCAGGAATGAGCAAGTTTGTTCCTATATCCAGAAGAGTTTTAAAGGGGCTCAAGGAATATGGAAGGAAACTGGTTGACCTGGAGTTATTCACACAGTATCTTGAGGAATGGGTCTTGGAGAATCTAAATGGTGATTCAGCAGATGGGTCTCAAAGTTTTAGTTCTCCCTTCACGATTGATGAGTTGCGCAAGCTTGATTTGGCATTAGAGGGGGTTCCATTTCAGCAATTGGTTCGTATGCCAATCCTCTCTGAGGTTTCTGATGACTATTTGGAAGATCAGTATCTAGCAGCAGAAGATTTCCTTCACGCCATCATCATTGGCCTTTGGCGTACATTTTGGCATAAAAGTGGACCACTGCCATTATGTGTCTCCTGCCCCTCTCATGTTGGTTCTAAGTTCAGCAGTGTGGAGAAAGCAATGTCAAGGGGAAGGTTGAAGGAAATGCGCGGCTTAGCTCTAATATCAAAAAATGAGAGTGATTTGAGATTCAAATGGGATCAGGTGGTAGAGTTTGCCTTATTCAAGCCAGAAGTAATCTTGGACAATGTTTTGAGAGTGTCAGCCAGTACTATTTGTGAAGCTCTCTTTTATGGCTTCCATGTTCTCGTTTCGCGCAGTTTGAGCAAGATAAGTTCAATTAACAGTGATTCTGTTTTTCTGCTAGTTCTTGATTCTAAGTGTGGCACGGTGATGAAGCTCAGTGGTGACCTTGGCAAACTTGATTTGCTAAATTCAAGCAATCCATATCTGTCTGTGGCTGAATGGATAAAAACTCATGCTGAAATTTGTGTCACCCGGGCGGAACCAATATGGAACAGATTGGGAAATGCCAAATGGGGGGATATAGGAACTCTGCAGATACTATTGGCAACTTTCTACTCTATTGCCCAGTGGAACGGACCGCCACGAAAATCAGTTGCCTCATTAATCTCAGATCACAGCCTTCGCCTTCAGAAGCGCCGGACAGAATGCTGCATCGTTGAGACTGAAAATGCACTGATTCCTTATCATGGTGCAGGAGAGATTGTTGAACTTGACCAAAATGAGTTCTTTTCCAAAAATCGAGCCTCACGTCTGAAGCTGAAGCACGGCGACATATTGGTCTTGGATGATCCGCAGCAGGGTCAGAAAAGTTTCCAAATTCATGAATCTTTGGTCGGAGGGAACTACTATCTCTATGGTTCAGTGTGTCTTGATCATCCTTCAGAGTTATTGTCTTTATATGTAGGTGCTCATCCATCTAGACTTGAGCCTTCTTGGGAGGATATGAGCCTCTGGTATCAAGTGCAACGTCAAACAAAAGTGCTAAACATTTTGAGGAATCAAGGAATCTTGAGCAAACATTTACCCGAAATTGTTGCCTCAGGTAAGATTGTACATTCCGGTCCTTGCAAGAAAGAAAGCCCTGGAGGAAAGTGTGATCATCCATGGTGCGGCACTCCGATTCTGGTGACATCTCCGGTAGGGGAGCCACTAACATCTGTAATTGCTCATGAGGGGACATTTTCTGCTGATGAAGCAACGCGCTTATGCCGAGACTGTCTCGCCGCTCTCAGAAGCGCAGCTGTGGCTAATGTCCAGCATGGTGATATCTGTCCAGAGAACATAATACGTGTTGACGAAAGACAAGGAGTTGCAAATAACCAAGCAATGTATGTCCCGATATCTTGGGGGCGCGCCGTGTTGGAAGATAGGGATAGCCCTGCTATAAACTTGCAATTCTCATCATCTCATGCACTTCAGCATGGGAAGCTGTGTCCATCTTCTGATGCTGAAAGCATTGTCTACATTCTTTATTTTATCTGTGGAGGGACCATGAGTCAACAAGATTCTATTGAGTCTGCTTTGCAATGGAGAGAGCGAAGCTGGGCGAAGCGCGTGATCCAGCAACATCTTGGTCAGGTTTCTGCTCTCTTGAAAGCATTTGCTGATTATGTTGATAGCCTTTGTGGAACTCCATACCCTGTTGACTATGATATATGGTTGAAGAGGCTGAACAAGGCTGTGGAAGGATCAGCAGATAAAGGTAAAATGATTGAAGAAATGGCGGTAACTTTGAGATTAGAAGATGCTGCAGAGTCTTCAGGAGCTTCTGGCTCTTGA 2217 0.4411 MQLDFLQNGMDFSPGKSLDGSFRKSSSVISTSNVSETSGMSKFVPISRRVLKGLKEYGRKLVDLELFTQYLEEWVLENLNGDSADGSQSFSSPFTIDELRKLDLALEGVPFQQLVRMPILSEVSDDYLEDQYLAAEDFLHAIIIGLWRTFWHKSGPLPLCVSCPSHVGSKFSSVEKAMSRGRLKEMRGLALISKNESDLRFKWDQVVEFALFKPEVILDNVLRVSASTICEALFYGFHVLVSRSLSKISSINSDSVFLLVLDSKCGTVMKLSGDLGKLDLLNSSNPYLSVAEWIKTHAEICVTRAEPIWNRLGNAKWGDIGTLQILLATFYSIAQWNGPPRKSVASLISDHSLRLQKRRTECCIVETENALIPYHGAGEIVELDQNEFFSKNRASRLKLKHGDILVLDDPQQGQKSFQIHESLVGGNYYLYGSVCLDHPSELLSLYVGAHPSRLEPSWEDMSLWYQVQRQTKVLNILRNQGILSKHLPEIVASGKIVHSGPCKKESPGGKCDHPWCGTPILVTSPVGEPLTSVIAHEGTFSADEATRLCRDCLAALRSAAVANVQHGDICPENIIRVDERQGVANNQAMYVPISWGRAVLEDRDSPAINLQFSSSHALQHGKLCPSSDAESIVYILYFICGGTMSQQDSIESALQWRERSWAKRVIQQHLGQVSALLKAFADYVDSLCGTPYPVDYDIWLKRLNKAVEGSADKGKMIEEMAVTLRLEDAAESSGASGS* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4401 738 Gene3D Transferase(Phosphotransferase) domain 1 391 733 - -
Lja1g4401 738 PANTHER KINASE FAMILY PROTEIN 5 737 - -
Lja1g4401 738 SUPERFAMILY Protein kinase-like (PK-like) 517 706 IPR011009 -
Lja1g4401 738 PANTHER KINASE FAMILY PROTEIN 5 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4401 Lja-Chr1 57079724 57084837 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4401 - - gmx:100782302 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4401 1 57079724 57084837 Lja1g4401 1 57079724 57084837 ECH