Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4380 ATGAGTAGCGACGACGGGTCGGATTCCAATGGATGGAACCGTGCTCGAGGGTTGGCGGTGAAGACTCTGCTACTCATCGGCGGTGCTCTTCTCGTCAAACGCCTCCGCAAGTCCACCACCCGCTGGGACCATGCTCGTTTCGTCTCTAACTCCCTCACCGGCGAAAAGTATTCAAAGGAGCAAGCTTCCAGAGACCCAGAAAACTATTTCAACATTAGAATGCTTACATGCCCAGCAGCAGAGTTAGTAGATGGTTCTAAGGTCCTGTATTTTGAGCAGGCTTTTTGGAGGAGTCCACAAAAACCCTTTCGGCAGAGGTTTTATATGGTGAAACCTTGTCCAAAAGAGTTGAAATGTGATGTTGAGTTAAGTACATATGCCATTAGAGACATGGAGGAATACAAGAATTTCTGTGATCGACCAAAGGATCAGCGTCCACAACCAGAAGAAGTCATTGGGGATATTGCAGAACATTTGACAACAATACATCTCAAGCGTTGCCCACGTGGAAAACGCTGCTTATATGAAGGTTCAACCCCACCTGGCGGATTTCCTAATTCATGGAATGGAGCAACCTACTGTACATCAGAACTTGCAGTTCTGAAGAACAATGAGATACATACCTGGGATAGAGGTTTTGATGATGACGGAAATCAAGTTTGGGGACAAAAAGATGGCCCTTACGAGTTCAAGCCTGCACCAACCTCCTGTTTTAATGATATGTTATCCCCCTTGAATTTCCCCCCTCCACCATCAATGGATAGAAGAATAGAGGGTTCATTCATTTTGCAAGATTGA 798 0.4574 MSSDDGSDSNGWNRARGLAVKTLLLIGGALLVKRLRKSTTRWDHARFVSNSLTGEKYSKEQASRDPENYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFYMVKPCPKELKCDVELSTYAIRDMEEYKNFCDRPKDQRPQPEEVIGDIAEHLTTIHLKRCPRGKRCLYEGSTPPGGFPNSWNGATYCTSELAVLKNNEIHTWDRGFDDDGNQVWGQKDGPYEFKPAPTSCFNDMLSPLNFPPPPSMDRRIEGSFILQD* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4380 265 Pfam CpeT/CpcT family (DUF1001) 49 231 IPR010404 GO:0016829|GO:0017009
Lja1g4380 265 CDD CpcT 52 233 IPR010404 GO:0016829|GO:0017009
Lja1g4380 265 Gene3D CpcT/CpeT domain 44 238 IPR038672 -
Lja1g4380 265 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 3 265 IPR010404 GO:0016829|GO:0017009
Lja1g4380 265 PANTHER BNAA01G14430D PROTEIN 3 265 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4380 - - gmx:100800615 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4380 1 56681437 56684754 Lja1g4380 1 56681437 56684754 ECH