Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4371 ATGGAAAATGAGGAGAATCTTCCTGGTTTTATTTTCATGTGCAACAGGATAACAAAGCCAGAGTGCTACCGGTTTCGAGTTTTTGGGCTACCTGCGGGGAGAAAGGATGTTGTGGCGAACATCAGACGTGGGACGTTCCTTTTTCTGTTTGACACTGATGTGAAGCTTCTCTATGGCATATATAGGGCTGACTCGACCGGGAGACTAAACATTGAGCCGTTCGCTTTCGGTCGCAAATTTCCTGCTCAGGTGAAATTCAACATTTACAAAGACTGTTTCCCCTTGCCAGAGAATCATTTTAAACATGCCATTATAGACAATTACCAGAGAGGCTCGAACAAATTTAATCCTGAACTCAGCAGTGGACAAGTAAGGAATCTACTAGAATTGTTTCGCCCATTACATGTATTGTCAACAGCACCTCCACGTCCTGTTTTGAACGAGATATACTCTCCCTCTACATTGCCACTGCCACCAATGAATAATGTTTTTCATCAGACATCAAGGTCGTCTTTTGAGGATTCCTATTTTTCTAGGATGTCACCTAATCAAGCTCCAAGACAGTTGAACTACAGACATGTAAATGAGCTCGCAGAGCCTACTGGTTGGGCCTATCCAGTCAACAAATTGATTCCAAATTCAGCTGCTGAACATTCTGTGATATCCCAAGCGCCAAGGAATCAGCTTCATGCAGAAGCAGTATACGCAGTTACTCCAGAGGGAACTTATGCAGCTAGGACGGCCACCAGTTATACACTATCCCATCCTCAATATACGCAGCAGGGTATCCTTAAGCCGCAACCTGAATTTCACACTCAGTCTTTGCATGATTCTCAACACGCTCATCTTAATGTCTTACATCCACAACATGATCTTCATCCCTCCATGATGACTATGCATAGTGGTTATGTTCAATCAATGCCAGATTCTCACCATCAACATCATAATATCCTTAACCAACCAGCTGATTATCATTCTGCAGTGGCGAATACAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGTTCAATCAATGCCAGATCCTCACCATCAACATCATAATATCCTTAACCAACCATCTGATTATCCCTCTGCAGTGGCAAATACAGGCAGCAGTCATGCCCAAACGGTTACGCATAGCAGTTATGTTCAATCAATGCCAGATCCTCACCATCAATATCATAATATCCTTAACCAACCAGCTGATTATCATTCTTCAGTGGCAAATACAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGTTCAATCAATGCCAGATCCTCACCATCAACATCATAATACCCTTAACCAACCAGCTGATTATCATTCTTCAAGATAA 1356 0.4299 MENEENLPGFIFMCNRITKPECYRFRVFGLPAGRKDVVANIRRGTFLFLFDTDVKLLYGIYRADSTGRLNIEPFAFGRKFPAQVKFNIYKDCFPLPENHFKHAIIDNYQRGSNKFNPELSSGQVRNLLELFRPLHVLSTAPPRPVLNEIYSPSTLPLPPMNNVFHQTSRSSFEDSYFSRMSPNQAPRQLNYRHVNELAEPTGWAYPVNKLIPNSAAEHSVISQAPRNQLHAEAVYAVTPEGTYAARTATSYTLSHPQYTQQGILKPQPEFHTQSLHDSQHAHLNVLHPQHDLHPSMMTMHSGYVQSMPDSHHQHHNILNQPADYHSAVANTGSSHAQTVMHSGYVQSMPDPHHQHHNILNQPSDYPSAVANTGSSHAQTVTHSSYVQSMPDPHHQYHNILNQPADYHSSVANTGSSHAQTVMHSGYVQSMPDPHHQHHNTLNQPADYHSSR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4371 451 MobiDBLite consensus disorder prediction 427 451 - -
Lja1g4371 451 MobiDBLite consensus disorder prediction 433 451 - -
Lja1g4371 451 Pfam Development and cell death domain 9 131 IPR013989 -
Lja1g4371 451 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 338 449 - -
Lja1g4371 451 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 3 331 - -
Lja1g4371 451 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 338 449 - -
Lja1g4371 451 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 3 331 - -
Lja1g4371 451 ProSiteProfiles DCD domain profile. 5 133 IPR013989 -
Lja1g4371 451 SMART dcd 5 133 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4371 Lja-Chr1 56493982 56498124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4371 - - lja:Lj1g3v1419290.1 813.913