Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4368 ATGGAAGCAAGCAGCAGCGAAATGGAAATCGACGCGGAAACGAAGCTGTTACGAGACAGGTTCCGCCTCTCCGCAATCTCCATCGCTGAATCTCAAGCAAACAAATCCGGCATGGAAGCATCGAAAGTCGTCGTCGCTTGCGTTTCCGATTTAGCCTTCAAATACACCGAGCGATTGGCTAAGGATCTTCAGCTTTTTGCGCAGCACGCGAATCGTAAATGTGTGAATATGGAAGATGTTATACTTTGTGCTCATAGGAATGAGCATCTAACTAGCTTGTTGAGGACTTTCTCAGATGAGTTAAAAGCCAAAGATCCTCCTTCTGAGAGGAAGCGAAAGAAAGAACCCAAGAAGAATGACAAAACAACCATTTAG 375 0.4533 MEASSSEMEIDAETKLLRDRFRLSAISIAESQANKSGMEASKVVVACVSDLAFKYTERLAKDLQLFAQHANRKCVNMEDVILCAHRNEHLTSLLRTFSDELKAKDPPSERKRKKEPKKNDKTTI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4368 124 Pfam CENP-S protein 20 90 IPR029003 GO:0071821
Lja1g4368 124 PANTHER CORTISTATIN 5 123 - -
Lja1g4368 124 SUPERFAMILY Histone-fold 28 90 IPR009072 GO:0046982
Lja1g4368 124 MobiDBLite consensus disorder prediction 101 124 - -
Lja1g4368 124 PANTHER CENTROMERE PROTEIN S 5 123 - -
Lja1g4368 124 Gene3D Histone, subunit A 2 106 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4368 K11511 - gmx:100798682 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4368 1 56437322 56438786 Lja1g4368 1 56437322 56438786 ECH