Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4359 ATGGATCGGAGGAGAAACTTGAGCCCGGTGTACACGCGGCAGTGGAGCGGCGGTTCAAGCAGCACCGGCTCATCACCGGCGATGTCTCCGGCTCATCCTCAGTCGCGCCTCGGTCCTTCCTCCACCGGGATTTCCACCGTCAAGCGCACTCAAAACGTAGCTGCCAAAGCCGCCGCGCAACGCCTCGCTCGCGTCATGGCGTCTCAGACCGCCGACGACGACGGCGACGAAGATGACGATCTAGGATTCCGGTTTAGTGCTCCTCCTCCTGCCGCTCTTTCCTCTTTCTCCAGCAGTAACAGAAGTAACAGCGCAAACGCAAACGCCAACGCCATCCCTCCGTTTTCGGTTGCCAGGCCGAACAGATCTCCTTCCCCTGCGTTAGGTCGGAACTTTGTAGAGCACACCCCTGCAGTGCGTTCAACGTCAGCTGGAAGACCGGCAGTTTCAGTTCGGTCAACACCGGTGGTGCCGCCACCGAGCAAACCTACACTCCGAACGCCTATGCTCGTTCCTCCCATTGATCCTCCTACCAATAGGAGTAGAGAGAAAAGGTTTACACCAGATATCACTATCAGGCAGCTTAACTCGAAAGACACAGGAGATCAGCGTGAAGCTTCTGCACTCCGTGATGAACTTGATATGCTACAAGAAGAGAATGAGAATATATTAGAAAAGCTAAGACAAGCAGAGGAAAAACGCCAAGAAGTGGAGGCCAGAGCTAGGGAACTTGAGAAACAGGTTGCTTCGCTTGGAGAGGGTGTATCCCTGGAGGCTAAATTGCTGAGCAGGAAGGAAGCTGCTTTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCAAAACAATCACAGAATGAAAGAGATGAGGATGTTACTGCCCTTCGTGTGGAGATTCAGAACCTAAAAGATGATGCTACAGCAGCTGAGGAACAACGGCAAGAAGCTGAAGCTGAAGCAAAGGCTCTTCGGACAATGACACAGAGAATGATTTTGACCCATGAAGAAATGGAGGAAGTTGTCCTGAAGAGATGTTGGCTTGCCCGCTACTGGGGTCTTGCTGTAAAACATGGCATATGTGCAGATATATCACAATCCAAGCATGAACATTGGTCTTCTCTAGCTCCTCTTCCTTTTGAACTTGTCATATCTGCTGGACAAAAGGCTAAGGAGGAATCATGGAACAAAAGTGCTGATGGTCCTGATAGAAGCAAACTTGTTCGTGATTTGAATGATCTCGCTGGGGAAGGAAACATTGAGAGTATGCTTTCAGTCGAGATGGGTTTGAGGGAACTTGCTTCTTTAAAGGTTGAGGATGCTGTTGTGCTTGCATTAGCCCAACACAGGCGGCCAAATTTGGTCCGGCAGTCTGTTTTAGATTCCAAAGCACCTGGGGATGCCAAATATTTGGAAGCATTTGAATTAAGTGAAGAAGAGGCAGAAGATGTTCTTTTCAAAGAGGCATGGTTAACTTATTTCTGGAGAAGAGCTTTATTTCATAGTGTGGAAGAAGATATTGCAGAAGAGCGGCTTCAGTTTTGGATAGTTCGCAGTGGACAGTCACCAACATCACATGATGCTGTTGATGTTGAGCGAGGTTTGTTGGAGTTGAGGAAGTTGGGTATAGAACAACAACTTTGGGAAGCATCGCGGAAGGGAATTGATCATCCTGATCGTGCGTCGGTAGTTACTAATCATAAGCCTGCTTCTGAGTCTGATGCCTCATCTTGA 1725 0.4922 MDRRRNLSPVYTRQWSGGSSSTGSSPAMSPAHPQSRLGPSSTGISTVKRTQNVAAKAAAQRLARVMASQTADDDGDEDDDLGFRFSAPPPAALSSFSSSNRSNSANANANAIPPFSVARPNRSPSPALGRNFVEHTPAVRSTSAGRPAVSVRSTPVVPPPSKPTLRTPMLVPPIDPPTNRSREKRFTPDITIRQLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQEVEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAKQSQNERDEDVTALRVEIQNLKDDATAAEEQRQEAEAEAKALRTMTQRMILTHEEMEEVVLKRCWLARYWGLAVKHGICADISQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKAPGDAKYLEAFELSEEEAEDVLFKEAWLTYFWRRALFHSVEEDIAEERLQFWIVRSGQSPTSHDAVDVERGLLELRKLGIEQQLWEASRKGIDHPDRASVVTNHKPASESDASS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4359 574 Coils Coil 290 327 - -
Lja1g4359 574 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 553 IPR040321 GO:0000911
Lja1g4359 574 MobiDBLite consensus disorder prediction 91 111 - -
Lja1g4359 574 Coils Coil 262 285 - -
Lja1g4359 574 MobiDBLite consensus disorder prediction 153 175 - -
Lja1g4359 574 MobiDBLite consensus disorder prediction 1 188 - -
Lja1g4359 574 MobiDBLite consensus disorder prediction 555 574 - -
Lja1g4359 574 Coils Coil 206 254 - -
Lja1g4359 574 MobiDBLite consensus disorder prediction 9 53 - -
Lja1g4359 574 PANTHER MYOSIN 1 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4359 Lja-Chr1 56289088 56298720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4359 1 549 EF-hand Containing Proteins AT5G13260 56.786 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4359 - - aprc:113865708 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4359 1 56289088 56298720 Lja1g4359 1 56289088 56298720 ECH