Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4353 ATGGGGTTACCACAAGTATCTTCAGGCTGCATTGCTGAGGAGGTGGCAGCATCATTTGTGCAAACTGCACCTAGGATTGCCAGCATAAGCAACAATGAGTTGAACTTGTTGGCTGGGGAAGAAGAACGTTGTAATCGCACGAAAATTCACATGCCTCACTCTGAGAGGAATAATGTTATAGAGCTCTCGAAATCACATGTTTCAAAGACGAGCAAAGATGGTAAATCCAACATACAGAAGTTGAAGATTGACTCCATGGAACAAATTGCCAGGTTGTCTGTCAATACAGAGCAAACACCTACTTCAAGGACTGTAGGTTTTCGTATAAGAGCATCAACTCCTTGCGTTAATGGTTTTGGTGGAAATGGATATTCGTCATCTGTGTTTAATGCCACCAATGACGCAACTGAAGCATCTAAATCGCAAGTCAGGAAGCGATTATTGTCACCTTTGAATGGAATGATGCTTGCTGATCATTTTAGAGGTGATCCTCTGGACATTGGTGAAGGTAATCATCGAACTTGTCCGAAAGTTGGAGATGATTGTCATAATGCTATACATGAGTATAAGAAGGTTCATATTGGAGATGACATCAATATTCAACCCACAATTTGGTCGTCTGCTTATTTTCAGGAATTTGTGAACTCATCTTGTAATGACTCTGGTATGAACAAGAACAAAATTGTTTCTAGTCATGACAGTTCACACAGTGAGCATGAGGAGTCAATGTGTTATAAGCATTTGAAATCGTCTTCAGAACTTAATGATTCTAAAGAGAGAACTAAATTGAAGTCCCTACCAGTGGCGTTATCAATACCTCAGAAAAAGGTGTCATCACCTCGCTTCCCTTTGTCTCCGCTGGGTAAAAAATCTTCTACAAATGAAAAATTGGGAGGGTGCAGAACTATTGATGTTATGTTGGATGATGGCAATCTGAGTTTTAAAGATGTAGAAGAATCTCTTGATAAAACTTGTCAAGGATTTAAATCACAGCTCTATTATAACAGTATGCAGCAAAAGTCTGACATGTTTACTCGTGATAAGATCATCGACATGAATGATTATTGGACTCGTCCTGCTAGCTTTCCTCCTAAGCATGCCAATTTTTGTGGAACTATGAGTAGATTGCCTAGTAGAAGGTCCCTGATTGGCTCATTTGAGGAATCGCTGTTATCTGGTCGCTTACTGTCCGGGAAAGTTAGTCAGAAAATTGAAGGCTTTCTTGCTGTGTTGAATGTAACTGGTGGCAATTTCTCACCACAATCGCAAAAAGTTCCATTTGGCGTATCCAGCGTGCAAGGAGACAAGTATTTATTATATTATTCATCAATTAATCTTTCAGGAAAATTATCAAGCAAGTCTAGAGTCTCTAAATTTCAGAGAACCCTTAGCATGGATGAATCACGATCTGAAAAGAGCCGTATACGCATACCTATGAAAGGACGCATTCAACTGGTTCTCAGCAATCCAGAGAGGACACCTATTCACACCTTCTTTTGCAACTATGATTTGAGTGACATGCCAGCTGGTACCAAGACATTCTTGCGGCAAAAAATCACTTTAACCTCGTCTAGATCAATGACCGGGACTGGAAAAGAAAGCGAAACAGATCCTGACACTAGAGCTGATGACAAGTCTTCATTAATCTCAAATACCAGTCACAGAGATAAAGATCTTCTGACCTCAAAATGTGGAGACTTTGATAGTTTCGCACCTACAGAGGCTGGTAATGAAGAAAACTTTAGTTCAAGCACATGCCTTGTTAATGAAGACAAATTTATACATGATTCTTCAAAGACCAATGACAATGGTGTTAACACTGGCATTCTGCTTTATGCTCTTCACCTTCGCTTTGTCTGCCCCTTGCCTAAGAAACGTTCAAGGTCTGTTCATAAGTGCAAATCCGACCCTCTCGCTGCAGAAGTGAGAAATATTATGGACAATGACCCTGAAAGAAGCTTCTACTTGTATGATGATATGAGGGTAGTGTTTCCTCAACGTCATTCAGATTCTGATGAGGGCAAGTTACATGTGGAATATCATTTCCCTTCCAATCCAAAATACTTCAACATCAGCTGCTGA 2082 0.4011 MGLPQVSSGCIAEEVAASFVQTAPRIASISNNELNLLAGEEERCNRTKIHMPHSERNNVIELSKSHVSKTSKDGKSNIQKLKIDSMEQIARLSVNTEQTPTSRTVGFRIRASTPCVNGFGGNGYSSSVFNATNDATEASKSQVRKRLLSPLNGMMLADHFRGDPLDIGEGNHRTCPKVGDDCHNAIHEYKKVHIGDDINIQPTIWSSAYFQEFVNSSCNDSGMNKNKIVSSHDSSHSEHEESMCYKHLKSSSELNDSKERTKLKSLPVALSIPQKKVSSPRFPLSPLGKKSSTNEKLGGCRTIDVMLDDGNLSFKDVEESLDKTCQGFKSQLYYNSMQQKSDMFTRDKIIDMNDYWTRPASFPPKHANFCGTMSRLPSRRSLIGSFEESLLSGRLLSGKVSQKIEGFLAVLNVTGGNFSPQSQKVPFGVSSVQGDKYLLYYSSINLSGKLSSKSRVSKFQRTLSMDESRSEKSRIRIPMKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTKTFLRQKITLTSSRSMTGTGKESETDPDTRADDKSSLISNTSHRDKDLLTSKCGDFDSFAPTEAGNEENFSSSTCLVNEDKFIHDSSKTNDNGVNTGILLYALHLRFVCPLPKKRSRSVHKCKSDPLAAEVRNIMDNDPERSFYLYDDMRVVFPQRHSDSDEGKLHVEYHFPSNPKYFNISC* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4353 693 Pfam Domain of unknown function (DUF4210) 382 426 IPR025261 -
Lja1g4353 693 MobiDBLite consensus disorder prediction 532 553 - -
Lja1g4353 693 Pfam Chromosome segregation during meiosis 610 691 IPR033473 -
Lja1g4353 693 PANTHER GH03947P 1 692 - -
Lja1g4353 693 MobiDBLite consensus disorder prediction 524 553 - -
Lja1g4353 693 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 1 692 - -
Lja1g4353 693 SMART DUF4210_2 382 441 IPR025261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4353 Lja-Chr1 56176538 56185998 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4353 - - lja:Lj1g3v1465200.1 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4353 1 56176538 56185998 Lja1g4353 1 56176538 56185998 ECH