Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4346 ATGTCACATAGTCATGACCTCTCTTTTGCCTTTGGGCTTCTAGGTAACATTGCCTCCTTCATCTGCTTCCTTGCACCAGTACCTACATTTTATAGAATTTGTAAAAAGAAATCAACAGAAGGGTTCCAATCAATTCCATATGTGGCTGCACTCTTCAGTGCAATGCTTTGGCTCTTCTATGCCTATGTCAAGACCGGAGCAACTCTTCTTATCACTATTAATGCATTCGGTTGTGTGATTGAGACCATTTACCTTGCCATCTTTCTCTCTTACTGCCCCAAGAAAACTAGAATGTCAACATTGAGGATGATTGTGTTGCTGAACTTAGTTGGATTTGGCTCAATTGTGGTTCTAACCCACCTCCTAGCAAAAGAACCTGAAGGGCGTGTCAAGATTCTTGGGTGGATTTGTGTAGTATTTGCTACTAGTGTTTTTGCTGCACCTTTAAGTATTATGAGGACAGTTATTCGAACCAAGAGTGTAGAGTTTCTTCCTTTTCCACTATCACTTCTACTCCTGATAAGCGCAATTTTGTGGCTGTTATATGGAATTTCATTGAAAGACATCTATGTTACGCTCCCGAACGTTGTGGGGTTAACATTTGGAATCATTCAGATTGTACTGTATGCAATCTACAGAAACAACAAACCAGTTCAGGATGAGAAGCTCCCACAACACAAAGGGGATATCAACAACAATAATGAAAATGTTGCTCCAGCAACCTTGAGTGATGAGAAACAAAAAGAGAGTGCTCCTCAGAAGGGAGATATTGAGTTTGGGGAGAAGATTAAGGAAGAGAAGCAAGTTGATCCGAAAGTTGATGAGAAGAAGCAGGAACAAGTAGCTAATGGTGATCAAACAGAGTTGAACAACAAAGCAGGGGATAGTGAGAATTGCCAAGTTTGA 906 0.4062 MSHSHDLSFAFGLLGNIASFICFLAPVPTFYRICKKKSTEGFQSIPYVAALFSAMLWLFYAYVKTGATLLITINAFGCVIETIYLAIFLSYCPKKTRMSTLRMIVLLNLVGFGSIVVLTHLLAKEPEGRVKILGWICVVFATSVFAAPLSIMRTVIRTKSVEFLPFPLSLLLLISAILWLLYGISLKDIYVTLPNVVGLTFGIIQIVLYAIYRNNKPVQDEKLPQHKGDINNNNENVAPATLSDEKQKESAPQKGDIEFGEKIKEEKQVDPKVDEKKQEQVANGDQTELNNKAGDSENCQV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4346 301 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 7 289 - -
Lja1g4346 301 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Lja1g4346 301 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Lja1g4346 301 MobiDBLite consensus disorder prediction 222 301 - -
Lja1g4346 301 PANTHER RAG1-ACTIVATING PROTEIN 1 7 289 - -
Lja1g4346 301 MobiDBLite consensus disorder prediction 283 301 - -
Lja1g4346 301 Gene3D - 10 96 - -
Lja1g4346 301 MobiDBLite consensus disorder prediction 247 282 - -
Lja1g4346 301 MobiDBLite consensus disorder prediction 229 243 - -
Lja1g4346 301 Gene3D - 129 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4346 Lja-Chr1 56129353 56131536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4346 1 281 Miscellaneous Gene Families AT5G50800 52.349 1.19e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4346 K15382 - gmx:100810426 426.017