Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4339 ATGTCGTTTCAGTCTCTGTGTTGTTTCTTTGTTGATCTATCTTCATTCTTCAACCTCTCTCTCTCTCTCTTCACTCTTCATGCTGCTGCTGCTCCTCCACACTCTCCGCCAATAGCCAGTTCCAACCACCGCCTCCTCCTCCTTCCTCGCCGCGTTTTCTGTTGTTTCATGGAACCGCAACCGCTTCAACGCGTCGTCGCCGCCGTTATCGTAACCGCCTTACTCTTCTCCGTCGTTCTCCTCGCCCTTCTCGCAGATTCGCGCGGCGGCGCTCTCGCCGGAATCCTATCCCGGCGGTTAACGGAACGAAGCAACGAAACGCTCCATTCTCAGCATCGGAAACTTCTTCGCAGTGGGACTGAAATGGTGGAACCGGAGAGAATATGGGGTGACAACAAGTGTGGCAAGTCTGATATTGTGATCAACCAGGGCCCCACGGCGCCGCTACCGAGTGGGATTCCGACGTACACGGTGGAGATTATGAACATGTGTGTCAGTGGATGTGACATCTCCTCCATTCACCTTAGCTGTGGCTGGTTCAGCTCTGCACGGCTCATCAACCCCAAGGTGTTCAAGCGCCTCCGCTTCAATGACTGCCTTGTCAATGATGGCAGACCCTTGATCAATGGTGGCACCATTTCTTTTCAGTATGCTAATACCTTCCTATATCCTCTATCTGTTTCCTCTGTTGCCTGTGAGTCTGATTGA 708 0.5254 MSFQSLCCFFVDLSSFFNLSLSLFTLHAAAAPPHSPPIASSNHRLLLLPRRVFCCFMEPQPLQRVVAAVIVTALLFSVVLLALLADSRGGALAGILSRRLTERSNETLHSQHRKLLRSGTEMVEPERIWGDNKCGKSDIVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISSIHLSCGWFSSARLINPKVFKRLRFNDCLVNDGRPLINGGTISFQYANTFLYPLSVSSVACESD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4339 235 PANTHER PROTEIN TAPETUM DETERMINANT 1 65 232 - -
Lja1g4339 235 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 65 232 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4339 Lja-Chr1 56042773 56045072 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4339 - - vun:114195900 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4339 1 56042773 56045072 Lja1g4339 1 56042773 56045072 ECH