Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4334 ATGGCTACGGAAACCCTAGAAGATCACAACAAGCCTCCGGTTCAGGCCGAAGGTGACGACGCTGCACCGAACAATCAGGAAACCGAAGTCAAAGGTGAAGCTGAGGCAGAAGAGAAAGAGGCAGCACCGCAAGAAGATGAAGATGCTTCGGCGGAAGCTGTGAAATCTGAGGCGGAGAATGCGGAGGAGAAAGACAAAGGGGGCGATCAGGTGGAGGAGAAGGAGGAGGTGGAGAAAGAGACTGACGAGGTCAAAGATGAGGTGAAGGGCGAGGAGGAGAAGGATGAGGAGGATGAAGACGGTGGTGAAGGTGAAGGTGAAGGTGAAGGAGAGGAAGAGGAGGAGCAGGAGGAGGAAGAGGAAGCTGAAGCTGAAGCTGATGAGAAGGTGAAGGCTAAGAGGGGTCCGAAGAAGGGGGGTAAGAAAGAGACTGCGTCGGAGAAGAAGGATCCAGCTACGCCGGCAAGTGAGAGGCCGACTAGGGAGAGGAAAACGGTGGAGCGCTACTCTGTGCCCTCGCCTTCGAAGTCTGCAAAGTCCTCCGGGGGTAAAGGGTTGGTAATTGAAAAGGGTCGTGGTGAGCAGCTTAAGGATATCCCAAATGTGGCTTTCAAGTTGTCAAAGAGAAAACCGGATGACAACCTGCACGCTCTTCACAGTATACTGTTTGGGAAGAGAACAAAGGCATACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTTTGTCTGGACTGAAAACGAGGAAAAACAGAGGGCCAAAGTAAAAGAGAGGATAGACAAATATGTGAAAGAAAAATTGGTGGACTTCTGTGATGTTCTTAATATTCCTGTAAGCAAAGGCAATATCAAGAAGGAGGAACTATCTGTGAAGCTGTTGGAATTTTTGGAGAACCCTCAGGCTACAACTGATGTTCTGCTTGCTGATAACGAGAAGAAAGTTAAAAAGCGAACAAGAAAGGTTACCCCTAGCAAATCTCCTGGTGAAGCATCCACTGAAACACCTGCCAAGAAGCAAAAGAAAACTTCAGAATCTGGGAAAAAGCGAAAGGGCTCTTCTGATGTTGAGGAGGATGAGAAAGCTGAACTCTCAGATGCAAAAGATGAGTCTCAGGAGAATGTTGCAGCGCCACATAAAGAAAGTGATGATGATGAAAGTAAATCAGAGGAAGAGGAAGATAAATCCAAAGCTCAGAAGAAGACTTCGAAAAAGATTGTGAAGGAGGGTTCAGGTTCCAAAGCTGGGGAAAGAACTAAATCTGCGAAGAAAACCCCTGTCAAATCTTCCAAAAACGTTGACAAAACTCCAAAAAAATCAACTCCAAAACAGACTGCTGCTGAGCATGATAGTGCTTCTGCCTCCCTTTCCAAGTCGAAGCAACCTGCATCCAAGAAGCGAAAAACTGAAAATGAAAAGCCTGACACTAAGGGTAAGGCCTCGAGCAAAAAACAAACAGACAAGTCCTCAAAGGCATTGGTTAAGGACCAAGGAAAAAGCAAAAGTGGTAAGAAGGCCAAGGCAGTACCTAGTCGGGAAGCCATGCATGCAGTTGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCTACTTTGTCTGATATCCTCCGGCAACTTGGTACTCACTTTGGTGTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATTATTACAGATGTAATTAATAACATGTCTGATGAGGAAGATGAAGGTGAGGAAGCTGATGGTGATGGTGATGCAGATAAAGATGACAATGGTGATGATGATGATGAGTGA 1779 0.457 MATETLEDHNKPPVQAEGDDAAPNNQETEVKGEAEAEEKEAAPQEDEDASAEAVKSEAENAEEKDKGGDQVEEKEEVEKETDEVKDEVKGEEEKDEEDEDGGEGEGEGEGEEEEEQEEEEEAEAEADEKVKAKRGPKKGGKKETASEKKDPATPASERPTRERKTVERYSVPSPSKSAKSSGGKGLVIEKGRGEQLKDIPNVAFKLSKRKPDDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKYVKEKLVDFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEKKVKKRTRKVTPSKSPGEASTETPAKKQKKTSESGKKRKGSSDVEEDEKAELSDAKDESQENVAAPHKESDDDESKSEEEEDKSKAQKKTSKKIVKEGSGSKAGERTKSAKKTPVKSSKNVDKTPKKSTPKQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALVKDQGKSKSGKKAKAVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAEVKDIITDVINNMSDEEDEGEEADGDGDADKDDNGDDDDE* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4334 592 Coils Coil 108 132 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 89 125 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 1 15 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 462 510 - -
Lja1g4334 592 Pfam DEK C terminal domain 509 561 IPR014876 -
Lja1g4334 592 Coils Coil 44 64 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 24 38 - -
Lja1g4334 592 PANTHER DEK PROTEIN 75 588 IPR044198 GO:0003677|GO:0006325
Lja1g4334 592 MobiDBLite consensus disorder prediction 126 169 - -
Lja1g4334 592 Gene3D - 501 564 - -
Lja1g4334 592 SUPERFAMILY DEK C-terminal domain 503 563 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 364 444 - -
Lja1g4334 592 Coils Coil 353 373 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 46 74 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 445 459 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 334 357 - -
Lja1g4334 592 Coils Coil 74 94 - -
Lja1g4334 592 Coils Coil 245 265 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 1 192 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 563 592 - -
Lja1g4334 592 PANTHER OS01G0924900 PROTEIN 75 588 - -
Lja1g4334 592 MobiDBLite consensus disorder prediction 307 512 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4334 K17046 - gmx:100813123 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4334 1 55991288 55998904 Lja1g4334 1 55991288 55998904 ECH