Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4331 ATGACCAAGTTGTGGACCTTGATTACCCAGCTTCATTCCCTTGCTGGGCCGGTTTTGACGTTATTGTACCCTTTGTATGCATCGGTGGTAGCAATAGAGAGCCCATCCAAGGAGGATGATGAGCAGTGGCTATCTTATTGGATCATCTATTCATTCCTCACCCTTGGAGAAATGGTTCTTCAACCTGCTCTAGAGTGGATACCGATTTGGTATGAGGTGAAGCTGTTGTTGGCGGCGTGGTTGGTGTTGCCTCAATTCAAAGGGGCTGCTTACTTGTATGGGAAGTTAGTGAGAGAGAACATACGGAGGTACGCGACGGAGAAGGAGAAAAAGGAGCACAAACAGAAACAGGTTTCCCCAAAAAAGCAACAGGACAAGAAGTCTCCCACTGGAAGCAAGGGGAAGAAGAAGTTTGTTGACTTTATCATACCTAAGAAAGGGGATCAAGAGGCTTATTGA 459 0.4641 MTKLWTLITQLHSLAGPVLTLLYPLYASVVAIESPSKEDDEQWLSYWIIYSFLTLGEMVLQPALEWIPIWYEVKLLLAAWLVLPQFKGAAYLYGKLVRENIRRYATEKEKKEHKQKQVSPKKQQDKKSPTGSKGKKKFVDFIIPKKGDQEAY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4331 152 PANTHER HVA22-LIKE PROTEIN 1 152 - -
Lja1g4331 152 PANTHER HVA22-LIKE PROTEINS 1 152 IPR004345 -
Lja1g4331 152 MobiDBLite consensus disorder prediction 107 152 - -
Lja1g4331 152 Pfam TB2/DP1, HVA22 family 24 98 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4331 Lja-Chr1 55950848 55952378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4331 K17279 - gmx:100813655 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4331 1 55950848 55952378 Lja1g4331 1 55950848 55952378 ECH