Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4312 ATGGAGATCGAGCTCGATCAATTGCTCGCCGATCTTCAATCTCTCGATCATTCCGATCCATCCTCTCTCCGCGCTTCGCTCGATCAGATTCAATCGCGCGTTGAGAATCTCGCTAATGTGGCTAGGTCTGGACCTGTTCGACGCCCCAAAGTTGAGTGCCAGGATATGAGTTCTGAGGTGGTGGATAGCAATCCGTACAGTCGGCTCATGGCGCTTCAGAGAATGGGTATTGTGGAGAACTATGAACGGATACGGGATTTCTCCATTGCCATAGTTGGAGTAGGTGGTGTGGGAAGCGTTGCAGCTGAGATGCTAACTAGATGTGGTATAGGTCGACTTTTGTTGTATGATTATGACAAAGTGGAGCTTGCAAATATGAATAGACTCTTCTTTCGTCCAGATCAGGTTGGCATGACTAAGACAGATGCAGCTGTACAAACTCTTTCAGATATAAACCCTGACGTGGTGCTTGAGAGCTATACATTGAATATCACAACAGTTGATGGCTTTGAAACCTTTGTGTCATCTTTGAATAATAAGTCATTTTGCCCCAGTAAAGAAGGTACTGGTGTGGATCTTGTCTTAAGCTGTGTGGATAATTATGAAGCAAGAATGGCCGTTAACCAGGCTTGTAATGAACTGAGCCAGACATGGTTGGAATCAGGTGTTTCTGAGGATGCTGTTTCTGGTCATATTCAATTACTTATTCCTGGTGAAACTGCGTGTTTTGCATGTGCACCTCCTTTGGTTGTAGCTTCTGGTATAGATGAACGTACACTCAAGCGTGAAGGGGTCTGTGCTGCATCTTTACCAACCACCATGGGGGTTGTTGCTGGGCTTCTAGTTCAAAACACGCTAAAATTCTTGTTAGGTTTTGGTCAAGTCTCTCCTTATTTGGGATATAACTCCCTTAAGGATTTTTTCCCCACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGCAGCTTGCTTAAAGAGACAGGAAGAGTACATTCTTGCAGAGCCAGCAAGAGATGCTGCTGCAAAAGCAAAATTGGAGGCTGAACCACAATCAGTTGAGGAAGGTCCCCTTCATGAGGATAATGAGTGGAATATAAGTGTCGTTGATGACAATGAGCCGGAAGGTGTTGATACCAAAAGCTCAGATGTCCTACCTGAAGGTCTCACTCGTGAATTTCCTAGTGCGGATGAGTCTCCGAGCCTGGATACTTCTGAAGCTCCTGTAACTGATGATGATGACCTTGATGCTCTGCAAAAGCAACTTGAAGCCCTTAATTCTGCATAG 1287 0.4491 MEIELDQLLADLQSLDHSDPSSLRASLDQIQSRVENLANVARSGPVRRPKVECQDMSSEVVDSNPYSRLMALQRMGIVENYERIRDFSIAIVGVGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVDGFETFVSSLNNKSFCPSKEGTGVDLVLSCVDNYEARMAVNQACNELSQTWLESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGIDERTLKREGVCAASLPTTMGVVAGLLVQNTLKFLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNAACLKRQEEYILAEPARDAAAKAKLEAEPQSVEEGPLHEDNEWNISVVDDNEPEGVDTKSSDVLPEGLTREFPSADESPSLDTSEAPVTDDDDLDALQKQLEALNSA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4312 428 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 428 IPR045886 -
Lja1g4312 428 Gene3D - 83 344 - -
Lja1g4312 428 Coils Coil 415 428 - -
Lja1g4312 428 MobiDBLite consensus disorder prediction 342 414 - -
Lja1g4312 428 MobiDBLite consensus disorder prediction 342 366 - -
Lja1g4312 428 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 89 117 IPR029752 -
Lja1g4312 428 PANTHER BNAANNG16230D PROTEIN 1 428 - -
Lja1g4312 428 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 61 325 IPR035985 GO:0008641
Lja1g4312 428 CDD ThiF_MoeB_HesA_family 65 313 - -
Lja1g4312 428 Pfam ThiF family 66 320 IPR000594 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4312 61 176 EF-hand Containing Proteins AT2G30110 33.613 1.61e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4312 K12164 - jre:108994409 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4312 1 55653318 55658462 Lja1g4312 1 55653318 55658462 ECH