Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4299 ATGAAGCCGTGGACGACACACATGCGCCGCCACCACCAAGGATCCACCATTACTAGTTTGCTCTCCCCTGCTTCCGAAACTAACCTCATGGCGCTTACTTTTGAGATACTTGGCAAGTTCAACCGTGCTCGTGCCGCTAGATTGACACTCCCTCATTTTGTATGCCAAACGCCTTTGTTCATGCCTGTGGGCACACAAGGAACAATTAAAGGATTGACAAATAGCCAGCTGGAGGAAATTGGTTGCCAAATAATACTTGGAAATACTTATCACTTGGAACTTCGACCTACTTCGGAGCTTCTTGATGAAGTCGGTGGTCTTCACAAATTTATGAATTGGAAACGGGCTCTGCTTACCGACTCTGGCGGATTTCAAATGGTTTCACTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACGTTTCAGTCACCAGTAGATGGAAAGCCCATGCTTCTGACTCCTGAGGAATCAATTCAGATACAAAATAGAATTGGAGCTGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATCACTGGTCCAAGAGTGGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGAAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATTGTGCAAGGTGGTTTGGATCCTGTATTGAGGGATATCTGTGTCAAAGGTCTGGTGGAGCGCAATTTGCCCGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAACTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCCTCTTTGCCAGAGGATAAGCCACGATATGTTATGGGTGTTGGTTATCCACTTGACATTGTTGTTTGTAGTGCATTGGGTGCTGACATGTATGATTGTGTTTATCCTACCCGTACAGCACGCTTTGGCACTGCTCTCGTTCCTGAGGGAGTGTTGAAACTTAAACACAGAGCAATGGCTGATGACACCCGTCCGATTGATCCTACTTGCTCTTGCATGGTTTGCAAGACCTACACCAGGGCTTACCTCCATTGCCTTGTGACAAAAGATGCTATGGGGTCTCAGCTTGTGTCATACCATAATTTATATTACATGATGCAGCTTAGTAGGAATCTGCACTCTTCAATAGTTGAAGGAAGATTCCAAGAGTTTGTATGCGAATTTCTGCAGAAAATGTTCCGGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCTTGCTGTGCTACTCCATTTTCATCATGCCAAGAATATGATTCCGGAAAGTTGTCAGAAGAATTAGAGAAGGCACAAATGATACAAGCAGACAGACTTGAAAAAGTTGTATAG 1362 0.4442 MKPWTTHMRRHHQGSTITSLLSPASETNLMALTFEILGKFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTNSQLEEIGCQIILGNTYHLELRPTSELLDEVGGLHKFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIEAHKRPHDQNLFGIVQGGLDPVLRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTASLPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPTCSCMVCKTYTRAYLHCLVTKDAMGSQLVSYHNLYYMMQLSRNLHSSIVEGRFQEFVCEFLQKMFRKGDVPEWVCDAMEVAGIDISSCCATPFSSCQEYDSGKLSEELEKAQMIQADRLEKVV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4299 453 SUPERFAMILY tRNA-guanine transglycosylase 30 393 IPR036511 GO:0006400|GO:0016763
Lja1g4299 453 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 34 394 IPR002616 GO:0006400|GO:0016763
Lja1g4299 453 Pfam Queuine tRNA-ribosyltransferase 42 395 IPR002616 GO:0006400|GO:0016763
Lja1g4299 453 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 34 394 IPR004803 GO:0008479|GO:0101030
Lja1g4299 453 Hamap Queuine tRNA-ribosyltransferase [tgt]. 32 393 IPR004803 GO:0008479|GO:0101030
Lja1g4299 453 Gene3D - 29 396 IPR036511 GO:0006400|GO:0016763
Lja1g4299 453 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 28 418 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4299 K00777 - gmx:100806874 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4299 1 55385120 55392971 Lja1g4299 1 55385120 55392971 ECH