Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4276 ATGGCACTTTGTTCTCCAACATCATCACCATCACTCCATTCTCTCCCGTCGCGTTTCCCATCCCCACGGCGACTCCACGGAGGAACGACGCTGTTTCCGCCGCAACAACCTCTTCTCCCAATGGCGTCGTGGTCGTTATCTTCTTCCAAAACACCGTCTCAGTTACCTTCTTCCACTGTCAAACTCAACCGTAGCCACAACCACCACCGAAACTTCTTCAAATTCCGCGCTTCCGCAACCTCTTCATCGGGCAGTGGTAGCGGCGGTGCCAGCGTCGTTTTGTTGACCTCCACCGTCACGGTAACATTAGCTGTAGCTAATCGAGTTCTCTACAAACTCGCTCTTGTTCCCATGAGTGATTACCCCTTTTTCCTCGCTCAGCTCACAACTTTTGGCTATGTTGCTGTGTATTTTAGCATCTTGTATATCCGATACCGGTTAGGGATTGTTACCAATGAGATGCTGGCGATTCCGAAATGGCGGTTTTTGATTATCGGGTTTTTAGAAGCTTTGGGAGTGGCTTCTGGAATGTCTGCTGCAGTCATGCTCCCTGGACCAGTCATACCCATATTGAATCAGACTTATTTAGTTTGGCAGCTGATGTTTTCTACTCTTCTCTTGAGGAGAAGGTACTCAATCAACCAAATTGCTGGGTGTTTACTTGTAGCTGCTGGTGTTGTGATGGCTGTTACAAGTGGCTCTAATACAGGTCAGATGCTCTCCAAAGTTGAGTTCTTTTGGCCAGCACTGATGATTGTTTCTGCTGCCTTTCAAGCGGGAGCTTCTATAATCAAGGAGTTTGTTTTCATTGATTCTATCACTCGGTTGAAGCACAAGTCACTGGATATTTTTGTGGTCAATTCTTTTGGATCTGGGTTTCAGGCTCTTTTCGTGCTTCTCTTTCTACCTTTGCTTTCTAACTTGAAAGGCATACCATTTGTTCAACTTCCTTCATATCTTAAAAGTGGTGCGGGTTGCTTTCTAAACATTGGAGCTGATACATCAAGTTGTGCTGGTGCTCCCTTACTTCCGCTACTTTACATAGTTACCAATTTGGCATTCAACATATCCCTGCTTCAAGTTTTGAAATCTTCTTCAGCAGTTGTAGCTTCTCTCGTGTTAATGCTCTCAGTGCCTGTTTCTGTTTATATTCTTTCCCTCCCATTACCATATCTTCCTGAGGCAACAAGCCTGAGCCCATTTTTCCTGCTTGGATGTGGAGTTCTTGTATGTGGTCTTTATCTGTACAACACAACTCGACCTGCGAGAAATAGTTCTGAAATTGACTGA 1290 0.4519 MALCSPTSSPSLHSLPSRFPSPRRLHGGTTLFPPQQPLLPMASWSLSSSKTPSQLPSSTVKLNRSHNHHRNFFKFRASATSSSGSGSGGASVVLLTSTVTVTLAVANRVLYKLALVPMSDYPFFLAQLTTFGYVAVYFSILYIRYRLGIVTNEMLAIPKWRFLIIGFLEALGVASGMSAAVMLPGPVIPILNQTYLVWQLMFSTLLLRRRYSINQIAGCLLVAAGVVMAVTSGSNTGQMLSKVEFFWPALMIVSAAFQAGASIIKEFVFIDSITRLKHKSLDIFVVNSFGSGFQALFVLLFLPLLSNLKGIPFVQLPSYLKSGAGCFLNIGADTSSCAGAPLLPLLYIVTNLAFNISLLQVLKSSSAVVASLVLMLSVPVSVYILSLPLPYLPEATSLSPFFLLGCGVLVCGLYLYNTTRPARNSSEID* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4276 429 MobiDBLite consensus disorder prediction 1 32 - -
Lja1g4276 429 MobiDBLite consensus disorder prediction 1 16 - -
Lja1g4276 429 PANTHER PROTEIN CLT2, CHLOROPLASTIC 57 424 IPR013936 -
Lja1g4276 429 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 234 - -
Lja1g4276 429 Pfam CRT-like, chloroquine-resistance transporter-like 93 416 IPR013936 -
Lja1g4276 429 PANTHER PROTEIN CLT2, CHLOROPLASTIC 57 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4276 Lja-Chr1 55078535 55085806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4276 - - ccaj:109802647 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4276 1 55078535 55085806 Lja1g4276 1 55078535 55085806 ECH