Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4248 ATGATGAAGAAGATAACTCGCCGATCGAAGCAATCGAGCCCCGTCGTCGCCGCCGCCGCCGCAGCAGCTCCGGACGCCGAAGCAAACGAAAAGCAACTTCAAGAGGAGAGGATTCGTGAGCTCGAGCGAGAGAACAAAGAGTATCAGATGGAGATTGCAGAACTAAGGAAACAGAAGGAGAATGGTACTTCGGCTTCGGACAAGGGAGTTGAAAAGCTTAAAAAGGACTATCTGCAGAAGCTGAACTTACTCGAAGAACAGGTCACAGTATTGAAGAATAAACTAGGGTCCCAATCCCAATTTTCAACCCACAGGAAAAAAGTGGATGAATCAACCAAGCAGTTGCAATTTGAGATTCAGAGTTTAAAGGCTCAGAAGGTTCAACTGCAATGTAAGATGAAGTTACAGTCTGTGCAATCCAGATTATGCAAGGCCTTACTGGAAAAGGAAGTTCTTCAGCTTAAGAAAGAGGGAAGAAGGAATGACATCAAGACTCAAAGTTTGCTGGCTTCAAATGAGATGCTTAAAATAGTATTGCAGAGGAAGACTGAGGAAGCTTCTGCTGTTACTAAACGTCTAAGAGACTTAATTGAAGCGCGAAAAGTTATATTAAATCGTTCAAATGGTGCAAGAAATAGAAATGGCCAAGTAATTCAGGATGCTGAGCTTGAACTCGAGGTGACAACTCAATTACACAAGTTATGTTATCAATATGAATCCAAAATGGAAAAGATGACTGAAGAGATTGCGCAGCTAAAAGAAGAAATTGAGATGCACAGGCAGGAAAAGTTCAGTCCAATGTCTCAGTCACAGGAGGAAAATTTTGACATCATGGAGAAGGATTCTGATATCCAAGATTTAAAGGAACAAGTAAACAGCCTTAGTAGCCTACTTAAAGAGTTACAATTGCGGAAGGAGAAGCTTGATTGCGGGGATAAGAAGCAGGACCTGGGTCAGCATCTTTTTTCTGATGAGAGTAATGATAAGATAAGAGTGGATACCCCTGAAAGTTCAAGTGAAAATAATGTTAAGAGGGAGAAAACAGCTGAAGGGCTTTGTTGTTCATGCAGTAAGAAGTCTTTGTGCAAGACTACAAAGTGCAGGTGCCGATCAACTGGTGGGAGCTGCGGACCGTCATGCGGCTGCACACATTCTAAGTGTACAAATAGGGAACAAATCGAATTGGCAGGAAATGAAGAACCACCAAAATCAGAAAATTCAGTATGCAGTATGAACAATTTAGCTGTTGACAAAGATGGAAGTTCGGTCGCTGCTGAATGTGCTAAGCTACTCCAGAGTGCACTTGTTCAAAAACCTCCGAGTAACCGAGACAACCCGGGGCCCAAAAAGAAGCCATTATCTGACATCCAGAACTCACTGGTCAACATGGATGCTCCAAAGCAAGGTAAGAAAAAGAGAGGGCGGAAGCCAGTAATTCACCTTGTTACCAAGGATTCAATGTCCTCGTCCCCAGAAAATACCAGCAGCACCTAA 1494 0.4304 MMKKITRRSKQSSPVVAAAAAAAPDAEANEKQLQEERIRELERENKEYQMEIAELRKQKENGTSASDKGVEKLKKDYLQKLNLLEEQVTVLKNKLGSQSQFSTHRKKVDESTKQLQFEIQSLKAQKVQLQCKMKLQSVQSRLCKALLEKEVLQLKKEGRRNDIKTQSLLASNEMLKIVLQRKTEEASAVTKRLRDLIEARKVILNRSNGARNRNGQVIQDAELELEVTTQLHKLCYQYESKMEKMTEEIAQLKEEIEMHRQEKFSPMSQSQEENFDIMEKDSDIQDLKEQVNSLSSLLKELQLRKEKLDCGDKKQDLGQHLFSDESNDKIRVDTPESSSENNVKREKTAEGLCCSCSKKSLCKTTKCRCRSTGGSCGPSCGCTHSKCTNREQIELAGNEEPPKSENSVCSMNNLAVDKDGSSVAAECAKLLQSALVQKPPSNRDNPGPKKKPLSDIQNSLVNMDAPKQGKKKRGRKPVIHLVTKDSMSSSPENTSST* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4248 497 MobiDBLite consensus disorder prediction 483 497 - -
Lja1g4248 497 PANTHER KINESIN KIF4-LIKE PROTEIN, PUTATIVE-RELATED 2 486 - -
Lja1g4248 497 Coils Coil 277 304 - -
Lja1g4248 497 MobiDBLite consensus disorder prediction 321 342 - -
Lja1g4248 497 Coils Coil 31 65 - -
Lja1g4248 497 Coils Coil 235 262 - -
Lja1g4248 497 PANTHER KINESIN-RELATED PROTEIN 6 2 486 - -
Lja1g4248 497 Coils Coil 112 132 - -
Lja1g4248 497 MobiDBLite consensus disorder prediction 435 497 - -
Lja1g4248 497 Coils Coil 74 94 - -
Lja1g4248 497 Coils Coil 179 199 - -
Lja1g4248 497 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4248 Lja-Chr1 54473169 54478244 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4248 - - mtr:MTR_3g100230 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4248 1 54473169 54478244 Lja1g4248 1 54473169 54478244 ECH