Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4243 ATGGAGAGCTCGGATTCCACGCAATGCGTGCGAGTCGCCGTCAACATTCGCCCTCTGATCACGTCGGAGCTTCTTATCGGCTGCACCGATTGCATTTCCGTTGTTCCTGGAGAACCTCAGGTGCAAATCGGGTCTCATTCGTTCACCTATGATTATGTTTATGGTAGTTCGGGGTCGCCTTCGTCTAAGATATACGATGAATGTGTAGCGCCGCTTGTTGATGCACTCTTCCATGGCTATAATGCCACCGTTCTTGCATATGGTCAGACCGGTTCTGGGAAAACATACACTATGGGCACCAACTATAATGGAGAGGGAAGTGGTGGTGGAATTATACCCAAAGTATTGGAGACCATATTTGAAAGAGTTAAGACTATGGAGGACTCTAAGGAAATTTTGATTAGAGTATCATTTATTGAGATATTCAAGGAAGAGGTTTTTGATTTACTTGATCCCAATTCATCTAGAGGAGAGGTGGCATCTACTGCAAAGGCCACTGTGCCCACAAGAGTTCCCATACAAATCAGGGAAACAGTGAATGGAGGAATAACACTTGCTGGTGTGATCGAGGCTGTAGTTAAGACAAAAGAAGAAATGGCATCGTATCTCTCAAGCGGTTCATTGTCACGTGCCACTGGGAGTACCAACATGAATAGTCAATCAAGTCGCTCGCATGCTATATTCACAATCACTATGGAGCAAAAGAATGGGGATGATATCTTATGTGCAAAACTTCATTTAGTGGACCTAGCTGGTTCCGAACGTGTAAAACGAACTGGTGCAGACGGCATGCGTTTAAAAGAAGGGATTCATATCAACAAGGGTTTATTGGCTCTTGGAAACGTAATAAGTGCATTGGGGGATGAAAAAAAGCGAAAAGAAGGAGGCCATGTGCCATATCGGGATAGCAAATTAACACGGCTACTGCAGGATTCTCTTGGAGGGAACAGCAAAACAGTGATGATAGCATGTGTTAGTCCTGCTGACTCAAACGCTGAAGAGACTTTGAACACTTTAAAGTACTCAAACCGAGCTCGCAACATTCAGAACAAGGCAATTATTAATCGTGACCCAGTAGCTGCTCAAATGCATACAATGCGGAGTCAGATTGAGCAATTGCAAGCTGAGCTTCTATTTTATAGAGGTGATACCAGTGGACCATTTGAGGAACTTCAGATTCTTAAACACAAAATATCCCTACTCGAAGCAAGTAATGCAGAGCTACATCACGAGCTTAAAAGACACCGAATAACTTCCGAAAATTTAGCACAACGTGCTGTCGATGCTCAGGTTGAAAAGGACCAACTAATTATGAAAATAGAGTCAATTCGAAATGGTAAATCATGGGATGAGGTTGACTCAAACTCAAATCAGGATTATGATCTACTAAAATCCTATGTGTCAAAGATCCAACATCTGGAAGGGGAATTGCTTCGTTTGAAAATTTCAAATGCTATGAGTTCAAGCCGCTTCGTTGATTGTGCGGATTCCCATGACAATGGATACGGGTCAAAACATGGTGATGGTGTTGCATCTTTTTGTGGTGCCAAAGCTGTGGACATCCCAGATGATACGGAAGATGATGAAAAGGAGCTAGAACACTCATCTCTTCAAGAAAAGTTGGATCAGGAGCTCAAAGAATTGGATAAGAAACTTGAACAGAAGGAGGCTGAAATGAAGCTGTACAATAATGCCGATCCTTCAGTTCTCAGGCATCATTATGCAAAGAAGCTTCTAGAGATGGAACAAGAGAAGAAAATTTTACAGAAAGAAATTGAGGAACTTAAGTTCAATCTCACAAATATTTCATCTACATCTGGTGACGGAGATCAGAAGTTAAAGCAGGATTATCTTCAAAAGTTGACTACTCTCGAGGCACAGGTATCTGAACTGAAGAAGAAACAAGAAGCTCAAGCTCAACTCTTGAGACAAAAACAGAACAGTGATGAGGCTACGAAACAACTTCAAGATGAGATCCAGAGAATTAAAGCTCAGAAGGTTCAACTTCAACAAAAGATTAAGCAGGAATCTGAACAATTTAGGATATGGAAAGCTTCCCGTGAAAGAGAAGTTCTCCAGCTTAAGAAAGAGGGGAGAAGGAATGAATATGAGATGCATAAGCTGTTAGCATTGAATCAGCGGCAAAAGATGGTATTGCAAAGGAAGACAGAAGAAGCTTCGTTGGCCACAAAAAGACTGAAAGAGCTTTTGGAATCTCGAAAGGCTTCCTCTCGTGAAACTCTGGGTGGTGGAGGTGGGAATGGTCCTGGAATTCAGGCTTTGTTGAAGGCGATTGAGGATGAGCTTGAAGTCACTGTTCGAGTGCATGAAGTACGGTCAGAATATGAACGTCAAATGGAAGAGAGGGCTAAAATGGCAGAGGAAATGACCAGGTTAAAGGAAGAAGCAGAGATGACGAAGCAAAATAGTAGAAGTGATTGCCCCATATCAATGTCTCCTGGTGCAAGAAATTCAAGGATTTTTGCCCTTAAAAACATGCTTTCGACTTCTTCGACAACTCTAGTGTCAATGGCATCCCACTTGTCAGAGGCAGAGGAGCGAGAACGGGTTTTCAGTGGCAAAGGACGCTGGAACCAAGTCCGGTCCCTGGCTGATGCCAAGAGTTTGCTGAATTATTTGTTCAATATAGCATCTTCCTCCAGATGTTTATTGCGAGATAAAGAGGTAAATTGCAGAGAAAAGGACTTGGAAATAAGGGATCTAAAAGAAAAGGTTGTAATGCTAAGCTACTCGGTTCGACAATTGGAAATGATTAAAGCTGAACTTACTCATAAGCTGAGTTTGCAGAGCGCAGCTTTGACGAGATACTCAGAAACTTCCGGAGACTTATATTCTGACTTGAGTGGTGGAGGCCACAAGTATGACTTGCGCAAGTCGGAACACCGTCCGTCTACCCTTCTACTGGAGGACATGGACATATCTGAGACAGAATCGGATGATTATGATTTGGAGGCAACGGATGATGAGTGGAAAGAATCAGGGAAATTAGTAAGGAAAAGGAAATCTTTAACCAGACGGCCAAGCATGGAACATAATCAGTCAAAAACCAACAACCCCAAGGATCTCAAAGACAATTTAGGAGATGGATTTGCATCTGCATATGGAGAAACTGCATCAGATATCTGCTGCTCTTGTAGTAAAATCTCATCGTGCAAGACAACAAAATGCAAGTGCAAATCCAGGGGCAACAGTTGTGGGAGTTCTTGTGGCTGCCTAGCAACCAAGTGTGCTAACCGAGCATCATTGTCAAATGAGTCACAAGAGTCAATGCAATCGGGATTGGTTCAGAGGACAGGAAATAATCCAGGCATTGAAGAAGCAGATAAAGACCGACTTCTTGCTACTCAAGGTGCAGAGTTACTTCAGGGAGCACTGTCTGATAGGCCTGCTGAGACAAACAGTGACCAAGCCCCAAGAAAACCTCTCTCTGACATAGGAAATACACAGATCAAACCAAACCTTGAACAGAGAAAGAAACTGCGGAAATCCACTATAATTCTTATCAAACCAAACCTTGAACAGAGAAAGAAATTGCGGAAATCCACTATAATTCTTGTTTCAGACCCGCCACCTTCTTCGCAGCCAGAGATTTCCAATGTCCGCATCCCCAAGAAACAAAATATTACTAAAATTTACGAAACAAATATCGCTGCGAATAGTTGTAGACCACAGAGAAAGCCCCCGTCAAGACCCGAAAATGCAGCATGTGCCCCCAGGGCAGAGGCTAATTTTGTGGACCCAGATTCACCCCCATTGGAAGAATTTGTGATGTTTAATAGAAAGAAAATGGCAATAAAAACCAGAGCCATGGGGAACAAGGAAGTCTCGAGTCTAGGAAGAAGACTACGGCAGGACTCAACCTTAAGGTTTCCTCTGTTAAATTGA 3906 0.4281 MESSDSTQCVRVAVNIRPLITSELLIGCTDCISVVPGEPQVQIGSHSFTYDYVYGSSGSPSSKIYDECVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYNGEGSGGGIIPKVLETIFERVKTMEDSKEILIRVSFIEIFKEEVFDLLDPNSSRGEVASTAKATVPTRVPIQIRETVNGGITLAGVIEAVVKTKEEMASYLSSGSLSRATGSTNMNSQSSRSHAIFTITMEQKNGDDILCAKLHLVDLAGSERVKRTGADGMRLKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYSNRARNIQNKAIINRDPVAAQMHTMRSQIEQLQAELLFYRGDTSGPFEELQILKHKISLLEASNAELHHELKRHRITSENLAQRAVDAQVEKDQLIMKIESIRNGKSWDEVDSNSNQDYDLLKSYVSKIQHLEGELLRLKISNAMSSSRFVDCADSHDNGYGSKHGDGVASFCGAKAVDIPDDTEDDEKELEHSSLQEKLDQELKELDKKLEQKEAEMKLYNNADPSVLRHHYAKKLLEMEQEKKILQKEIEELKFNLTNISSTSGDGDQKLKQDYLQKLTTLEAQVSELKKKQEAQAQLLRQKQNSDEATKQLQDEIQRIKAQKVQLQQKIKQESEQFRIWKASREREVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASLATKRLKELLESRKASSRETLGGGGGNGPGIQALLKAIEDELEVTVRVHEVRSEYERQMEERAKMAEEMTRLKEEAEMTKQNSRSDCPISMSPGARNSRIFALKNMLSTSSTTLVSMASHLSEAEERERVFSGKGRWNQVRSLADAKSLLNYLFNIASSSRCLLRDKEVNCREKDLEIRDLKEKVVMLSYSVRQLEMIKAELTHKLSLQSAALTRYSETSGDLYSDLSGGGHKYDLRKSEHRPSTLLLEDMDISETESDDYDLEATDDEWKESGKLVRKRKSLTRRPSMEHNQSKTNNPKDLKDNLGDGFASAYGETASDICCSCSKISSCKTTKCKCKSRGNSCGSSCGCLATKCANRASLSNESQESMQSGLVQRTGNNPGIEEADKDRLLATQGAELLQGALSDRPAETNSDQAPRKPLSDIGNTQIKPNLEQRKKLRKSTIILIKPNLEQRKKLRKSTIILVSDPPPSSQPEISNVRIPKKQNITKIYETNIAANSCRPQRKPPSRPENAACAPRAEANFVDPDSPPLEEFVMFNRKKMAIKTRAMGNKEVSSLGRRLRQDSTLRFPLLN* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4243 1301 SMART kinesin_4 7 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 Coils Coil 534 565 - -
Lja1g4243 1301 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja1g4243 1301 CDD KISc_KIF4 9 349 - -
Lja1g4243 1301 Pfam Kinesin motor domain 41 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 MobiDBLite consensus disorder prediction 1227 1249 - -
Lja1g4243 1301 Coils Coil 614 679 - -
Lja1g4243 1301 Coils Coil 891 911 - -
Lja1g4243 1301 Coils Coil 571 605 - -
Lja1g4243 1301 MobiDBLite consensus disorder prediction 1001 1031 - -
Lja1g4243 1301 ProSiteProfiles Kinesin motor domain profile. 9 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 MobiDBLite consensus disorder prediction 1131 1154 - -
Lja1g4243 1301 PRINTS Kinesin heavy chain signature 298 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g4243 1301 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 7 1261 - -
Lja1g4243 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 381 IPR027417 -
Lja1g4243 1301 Coils Coil 719 739 - -
Lja1g4243 1301 Coils Coil 775 813 - -
Lja1g4243 1301 Gene3D Kinesin motor domain 4 382 IPR036961 -
Lja1g4243 1301 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 1261 - -
Lja1g4243 1301 MobiDBLite consensus disorder prediction 1134 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4243 Lja-Chr1 54356202 54375670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4243 6 414 Miscellaneous Gene Families AT5G06670 35.581 8.22e-58 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4243 - - gmx:100803644 1721.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4243 1 54356202 54375670 Lja1g4243 1 54356202 54375670 ECH