Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4233 ATGCGAAGTATGACAACTAGGGGCACTTCCAGCGGTATGAAGAAGAGTGGGAAAAATCAGATTTCTGAAGGAGGAGGGGAAGTTCAAGTGGCATTGGGAGATGTAATATATGTCAAGCTCCACGGTAGCTCGTGGTGGCCTGGACAGGTTGTTGATGATAATAGTGTTTCTGAGAGTGTTAAACCTAGCAAACGGTCAGCAAGGGAAGTCCTTGTTCGGCTGTATGGAAGCTATACATACTTGTATGCGGATCCTGCTAAATCCCGTTCAGAGTTTGAGGAGATACTCAAGCTTAATAATGGTTCCCACCAACAGATACTTCTGCAATCTCTTGAAAAGGATCTTCCTAGCACAAAGTCCTCTAGAGCAGAGGGGTCATCATCGAAGACTAAAGGAACACCGAGGCGAAGTCCTACAAGCAAGCGCCAAAAGCAAAATGATGATGATCTGGGTAGGCAAAGTCATGAACCATCTTCTGCAGGAATGTCCCAAGAGTTGAGTGCCCGGAGGATAAGAGTTCTGCGAGGCCTTGGTCTCATTGGTCCACCTGGGTCACCATTTGAGAGAGTTCGGAACGTTTAA 582 0.4674 MRSMTTRGTSSGMKKSGKNQISEGGGEVQVALGDVIYVKLHGSSWWPGQVVDDNSVSESVKPSKRSAREVLVRLYGSYTYLYADPAKSRSEFEEILKLNNGSHQQILLQSLEKDLPSTKSSRAEGSSSKTKGTPRRSPTSKRQKQNDDDLGRQSHEPSSAGMSQELSARRIRVLRGLGLIGPPGSPFERVRNV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4233 193 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g4233 193 MobiDBLite consensus disorder prediction 112 134 - -
Lja1g4233 193 Pfam PWWP domain 33 86 IPR000313 -
Lja1g4233 193 PANTHER ALDOLASE-RELATED 153 191 - -
Lja1g4233 193 PANTHER ALDOLASE-RELATED 6 148 - -
Lja1g4233 193 Gene3D - 25 127 - -
Lja1g4233 193 PANTHER OS08G0477800 PROTEIN 6 148 - -
Lja1g4233 193 PANTHER OS08G0477800 PROTEIN 153 191 - -
Lja1g4233 193 MobiDBLite consensus disorder prediction 140 154 - -
Lja1g4233 193 ProSiteProfiles PWWP domain profile. 32 94 IPR000313 -
Lja1g4233 193 MobiDBLite consensus disorder prediction 112 167 - -
Lja1g4233 193 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g4233 193 SUPERFAMILY Tudor/PWWP/MBT 31 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4233 Lja-Chr1 54176584 54186651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4233 - - lja:Lj0g3v0249369.1 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4233 1 54176584 54186651 Lja1g4233 1 54176584 54186651 ECH