LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g4226	ATGGCATCAATCTCAGGTGCTCTCTCATCTTCCCCAACGCTCAAATTCCAAACCCAAACTCAAGCGTTGACCAACCCACTCCGCAGAGTCCACGTGTCCTTCCCTGCTCGTTGCGCTGATCGGACGATTCGGACCTACGCCGTGGCTCGGGAGGTTTCCGATGCTGAGAAGGGGGAGATAGTGGCTTTGGAGAAAGACCCACGCGCGCTGTGGCGGAGGTATGTGGAGTGGATGTACCAGCACAGGGAGCTGGGGCTTTACCTCGACGTGAGTCGGGTCGGGTTTAGTGATGAGTTTGTGGCGGAGATGGAGCCCCGGTTTGAGGCGGCGTTCCGGGCGATGGAGGAGCTGGAGAACGGTGCGATTGCTAATCCTGATGAGGGTCGCATGGTGGGGCATTATTGGTTGAGGGATTCCAAGCGAGCTCCGAATGAGTTTCTTAAGACGCAGATTGAGAGCACTCTTGATGCTGTTTGTAACTTTGCTGATGATGTTGTCAGTGGTAAGATTAAGTCTCCGAAGGGTCGCTTTACTCAAATATTGTCTGTGGGAATTGGAGGTTCAGCTCTTGGACCACAGTTTGTGGCAGAGGCATTGGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGCCCTGAGCTCGCGACAACACTTGTGATAGTGATTTCAAAGAGCGGAGGTACACCCGAGACTAGAAATGGTTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCCGAAACAGGGTGTTGCTATAACCCAAGAAAATTCTTTGTTGGATAACACTGCCAGAATCGAGGGCTGGTTAGCTAGATTTCCTATGTTTGATTGGGTGGGAGGCAGAACATCAGAGATGTCTACGGTTGGCCTTCTTCCAGCAGCACTTCAGGGCATTGACATTAGAGAAATGCTTGCTGGTGCATCATTGATGGATGAGGCGAATAGAAGTACAACGTTAAGGAATAATCCTGCAGCGCTGCTGGCTTTATGTTGGTATTGGGCTACAGACGGTGTAGGATCAAAGGATATGGTTATTCTTCCGTACAAGGACAGTCTATTACTATTTAGTAGATACTTGCAGCAGCTGGTAATGGAGTCTCTAGGAAAGGAATTTGACTTGGACGGTAATCGGGTTAATCAAGGAATCAGTGTCTACGGAAATAAAGGAAGCACGGATCAGCATGCCTATATTCAACAATTGAGGGAAGGTGTGCACAATTTCTTTGTAACATTCATTGAGGTGCTACGCGATAGACCCCTTGGTCATGATTGGGAACTTGAACCAGGTGTCACATGTGGTGACTACTTGTTTGGTATGCTACAGGGAACAAGGTCAGCTCTGTATTCTAATAACCGAGAGTCTATCACAGTCTCAGTTCAAGAAGTGACACCAAGATCAGTCGGTGCTCTAATCGCACTCTATGAACGAGCTGTGGGAATATATGCCTCCCTTGTCAACATAAATGCTTACCATCAACCTGGTGTGGAAGCTGGTAAAAAGGCAGCAGGTGAAGTACTAGCACTTCAGAAACGAGTATTGGCAGTGCTAAATGAGGCAAGCTGCAAAGAGCCTGTCGAGCCATTGACACTTGAAGAAGTAGCTGAGCGTTGCCATGCTCCACAAGATATTGAAATGATTTACAAAATTATTGCTCACATGGCTGCAAATGACAGAGCACTTATTGCCGAAGGCAGCTGCGGTTCACCGCGGAGCATCAAGGTTTATATCGGGGAGTGTAATGTTGATGAGTCGTATGCTTGA	1821	0.4778	MASISGALSSSPTLKFQTQTQALTNPLRRVHVSFPARCADRTIRTYAVAREVSDAEKGEIVALEKDPRALWRRYVEWMYQHRELGLYLDVSRVGFSDEFVAEMEPRFEAAFRAMEELENGAIANPDEGRMVGHYWLRDSKRAPNEFLKTQIESTLDAVCNFADDVVSGKIKSPKGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELATTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSTVGLLPAALQGIDIREMLAGASLMDEANRSTTLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPLGHDWELEPGVTCGDYLFGMLQGTRSALYSNNRESITVSVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVAERCHAPQDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVYIGECNVDESYA*	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g4226	606	ProSitePatterns	Phosphoglucose isomerase signature 2.	502	519	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	606	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	CDD	SIS_PGI_1	152	315	IPR035476	-
	Lja1g4226	606	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	606	-	-
	Lja1g4226	606	Gene3D	-	317	511	-	-
	Lja1g4226	606	SUPERFAMILY	SIS domain	70	529	IPR046348	GO:0097367\|GO:1901135
	Lja1g4226	606	Hamap	Glucose-6-phosphate isomerase [pgi].	83	529	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	180	199	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	470	488	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	502	515	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	368	389	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	488	502	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	PRINTS	Glucose-6-phosphate isomerase signature	292	310	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	53	535	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	CDD	SIS_PGI_2	361	525	IPR035482	-
	Lja1g4226	606	Pfam	Phosphoglucose isomerase	113	436	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	Pfam	Phosphoglucose isomerase	467	527	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lja1g4226	606	Gene3D	-	133	316	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g4226	Lja-Chr1	54045251	54050017	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g4226	K01810		-	gmx:100791285	1090.49

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g4226	1	54045251	54050017	Lja1g4226	1	54045251	54050017	ECH