Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4224 ATGGCTTCTTCCACCACTTCCACACTCTTCTCCACTGCTCCTCCATCCTCCGCCGTCTCCTCCTCTGTGATACGGCGTCGTTTACCCCTTGTCGGCGCGTTTTGCATGCTCACTCTTGGGCTCTCCAATTTCTACAGGCCCTTGTATTCCTCTGCTCTCAAAACGGGATCTAGTTTGGCAAAGAGAAGTTACAGTATTAGAATGGAAGGGAACACCAACAACACCACTGTCCCAAGCATTGTTGTCTATGTCACTGTTCCCAACAAGGAAGCAGGGAAGAAGTTAGCTGAAAGCATTGTCAAGGAGAAGCTTGCAGCTTGTGTAAACAGAGTACCGGGTATTGAATCAGTATATCAGTGGCAGGGAGAGATCCAAACTGATTCTGAGGAACTTCTGATAATCAAGACTAGGCAATCCCTTCTGGAACCATTGACAGAGCATGTCAAAGCAAACCATGAGTACGATGTGCCAGAGGTAATCTCCTTACCCATCACTGGCGGCAATCTTAAATATTTAGAATGGATAAAGGAGAGCACAAGGGAGTGA 546 0.4707 MASSTTSTLFSTAPPSSAVSSSVIRRRLPLVGAFCMLTLGLSNFYRPLYSSALKTGSSLAKRSYSIRMEGNTNNTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWQGEIQTDSEELLIIKTRQSLLEPLTEHVKANHEYDVPEVISLPITGGNLKYLEWIKESTRE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4224 181 SUPERFAMILY GlnB-like 79 180 IPR011322 -
Lja1g4224 181 Pfam CutA1 divalent ion tolerance protein 80 177 IPR004323 GO:0010038
Lja1g4224 181 PANTHER PROTEIN CUTA CHLOROPLASTIC 12 180 - -
Lja1g4224 181 Gene3D - 71 181 IPR015867 -
Lja1g4224 181 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 12 180 IPR004323 GO:0010038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4224 K03926 - gmx:100792337 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4224 1 54032414 54034710 Lja1g4224 1 54032414 54034710 ECH