Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4211 ATGAGCGGCGATCAACCACACCCCCAACCCCCCACCACCACCACTACCGCCACTACCACCACCCCCACCAAACCCCATGACTCTGATTCTCACTCCACTGAGTACGCTCCTTACCCCAAACTCGACCCCAACGACGTCGTTCCACCACCACCATCTCAACCCATCAACACTCCTTCTCCACTCGATGCACGCGGCGATGCCGCCACCACCATGCCGACAGAGTCCAATCCCTATGTTTCTCCCTCGCCGGTTCCCACCTCCAATTCTTCTGCTAAGAATACTTTGGATTCGGTGAAGGATGCTCTCGGAAGATGGGGTAAGAAAGCCGCTGAAGCTACCAAGAAGGCCGAAGATCTCGCCGGAAACATGTGGCAGCACTTGAAAACGGGTCCTAGTTTTGCTGATGCTGCTGTGGGGAGGATTGCTCAGTCAACAAAAGTTCTTGCTGAAGGGGGCTATGAGAAGATATTTAGGCAAACTTTTCAGACTGTTCCGGAGGAGCAGCTTGTTAGAACTTATGCGTGCTACCTTTCAACCTCAGCTGGACCTGTGATGGGGGTTTTATATTTGTCGACTGCGAAGCTGGCGTTTTGTAGTGATAACCCGCTTTCTTACCAGACGGGTGAGGAGACTCAGTGGAGCTATTATAAGGTGGTCATTCCATTGCATCAGCTGAGAGCGGTGAACCCTTCAATAAGCAGAACCAACCCATCAGAGAAGTATATACAGATTATCTCTGTTGACAACCATGAGTTTTGGTTTATGGGCTTTGTGCATTATGATAGTGCTGTTAAACATATTCAAGAACTATTGCAGCCTCAGTGA 825 0.5018 MSGDQPHPQPPTTTTTATTTTPTKPHDSDSHSTEYAPYPKLDPNDVVPPPPSQPINTPSPLDARGDAATTMPTESNPYVSPSPVPTSNSSAKNTLDSVKDALGRWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQSTKVLAEGGYEKIFRQTFQTVPEEQLVRTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTGEETQWSYYKVVIPLHQLRAVNPSISRTNPSEKYIQIISVDNHEFWFMGFVHYDSAVKHIQELLQPQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4211 274 MobiDBLite consensus disorder prediction 69 93 - -
Lja1g4211 274 Gene3D - 153 273 IPR011993 -
Lja1g4211 274 MobiDBLite consensus disorder prediction 42 57 - -
Lja1g4211 274 PANTHER GEM-LIKE PROTEIN 2 23 273 IPR037848 -
Lja1g4211 274 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g4211 274 Pfam GRAM domain 156 272 IPR004182 -
Lja1g4211 274 CDD PH-GRAM_GEM 166 272 - -
Lja1g4211 274 PANTHER GEM-LIKE PROTEIN 1 23 273 - -
Lja1g4211 274 MobiDBLite consensus disorder prediction 1 93 - -
Lja1g4211 274 SMART gram2001c 155 232 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4211 Lja-Chr1 53785241 53789650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4211 - - aprc:113865936 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4211 1 53785241 53789650 Lja1g4211 1 53785241 53789650 ECH